Gene Information

Name : Bcenmc03_0082 (Bcenmc03_0082)
Accession : YP_001763384.1
Strain :
Genome accession: NC_010508
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 95622 - 96107 bp
Length : 486 bp
Strand : +
Note : PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_0053 lytic transglycosylase, catalytic

DNA sequence :
ATGAACAGACGGTTCGCTTCGATCGCGTTGATCGCCGCCGGCGCGTGGTTCGCCAGCGGCAACGCACGCGCGGACTGTTT
CGACGAAGCGGCCAAATATCAGCAGGTCAATCCGCTGATCCTGCGCGCGATCGCGTGGCAGGAATCGCGCAACCGGCCCG
GTGCGCTGAACAAGAACACGAACGGCTCGGTCGACTACGGCCTGATGCAGATCAATTCGATCCACTTGCCGACGCTGTCG
CGCTACGGAATCGGCCGCGACACGCTGATGGAGCCGTGCAAGAACGTGTACATCGCCGCGTGGCATCTCAAACAGAAGAT
GAACCGCTACGGCAACACGTGGCAGGCAGTCGGCGCCTATCATTCGGAAACGCCGTCGCTGCGCGACAAGTACGCGCGGC
AGATCGCCGCCATCCTGACGCAATGGAAGCTGCTGCCGCCCGCGCAGACCACCCAGGCCGCTCAAGCGCCTCAAGCCGCT
CAGTGA

Protein sequence :
MNRRFASIALIAAGAWFASGNARADCFDEAAKYQQVNPLILRAIAWQESRNRPGALNKNTNGSVDYGLMQINSIHLPTLS
RYGIGRDTLMEPCKNVYIAAWHLKQKMNRYGNTWQAVGAYHSETPSLRDKYARQIAAILTQWKLLPPAQTTQAAQAPQAA
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 7e-37 69
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-36 69
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 3e-36 67
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 7e-37 66
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 8e-37 66
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 8e-37 66
unnamed AAK26704.1 unknown Not tested LEE Protein 1e-17 44
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 2e-17 44
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 2e-17 44
unnamed AAL57531.1 unknown Not tested LEE Protein 1e-17 44
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 1e-17 44
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 1e-17 44
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 2e-16 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 8e-17 43
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 6e-17 43
unnamed AAC31524.1 L0045 Not tested LEE Protein 4e-17 43
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 6e-17 43
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 4e-17 43
unnamed AAL06358.1 unknown Not tested LEE Protein 6e-18 42
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 5e-15 42
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 5e-15 42
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 5e-15 42
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 5e-15 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_0082 YP_001763384.1 lytic transglycosylase VFG1789 Protein 2e-17 45
Bcenmc03_0082 YP_001763384.1 lytic transglycosylase VFG0719 Protein 9e-17 43
Bcenmc03_0082 YP_001763384.1 lytic transglycosylase VFG0823 Protein 2e-17 43
Bcenmc03_0082 YP_001763384.1 lytic transglycosylase VFG0539 Protein 1e-15 42