Gene Information

Name : Bcenmc03_0080 (Bcenmc03_0080)
Accession : YP_001763382.1
Strain :
Genome accession: NC_010508
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 91415 - 92914 bp
Length : 1500 bp
Strand : -
Note : KEGG: bam:Bamb_0051 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase

DNA sequence :
GTGAGCGACGTGCTCGCGTCCTCCGCCCACGACGGCGCGCCGGGCGAACGCCGGCCGCCGTCGCCGCTCGCCGCGCGCCT
GCTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCATCAGCTCGACGACACGCTCGAGGTGTGGATCAGCG
AACGCACGAGCGACGCCGCGCTCGCGGAAATCGCGCGCAACTTCGGTTCGATTTCCGTGCATCGCGTGCCGGCCGACGAG
CTCGCGCAGGCGATCAACCAGGCCTACGCGCGCCAGGACGGCAGCGCCGCGCAGGTGGTCGGCGAGGTCGAAGGCGAAGT
CGACCTGTCGCGGCTGATGCAGGACATCCCCGAAGTCGAGGATCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGGA
TGATCAACGCGCTGCTCACGCAAGCGGCGCGCGAACAGGCGTCGGACATTCACATCGAGCCATTCGAGAATGCGTCGGTC
GTGCGCTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGAT
CAAGATCATGGCGCAGCTCGACATCGCGGAGAAGCGCCTGCCGCAGGACGGCCGCATTACGCTGCGCGTCGGCGGCCGGC
CGGTCGACGTACGGGTGTCGACGCTGCCGACCGGACACGGCGAGCGCGCGGTGCTGCGTCTGCTGGAAAAGGATGCGCAG
CGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTGGTCCAGTTCGACAAGCTGATCGGCCGCCCGCACGGCAT
CGTGCTCGTCACCGGCCCGACCGGTTCGGGCAAGACGACCACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGA
CCAACATCATGACCGTCGAGGACCCGATCGAATACGACCTGTCCGGCATCGGCCAGACGCAGGTGAACGAGCGAATCGGG
ATGACCTTTGCCCGCGCGCTGCGCTCGATCCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGA
AACCGCGCAGATCGCGGTGCAGGCGTCGCTGACGGGCCACCTCGTGCTCGCGACGCTGCACACGAACGACGCGGCGTCCG
CCGTCACGCGCCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCACTGCTCGGCGTGCTCGCGCAGCGCCTG
GTGCGCCAGCTCTGCCCGGTCTGCAAGGAAGAGCGCCACGAGGACGGCCGGACCGTGTGGCATCCGGTCGGCTGCGCGAA
GTGCGGACATTCCGGTTATGCGGGCCGGCGCGGTGTGTACGAACTGCTGGTGATCGACGATTCGATCCGCTCGCTGATTC
ACCGCAACGCGGCCGATGCTGAAATTCTCGCCGCCGGCCGCGCGGAAGGCATGCGCACGCTGCGCGACGACGCCGAGCGC
TGGCTCGCGTCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG

Protein sequence :
MSDVLASSAHDGAPGERRPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTSDAALAEIARNFGSISVHRVPADE
LAQAINQAYARQDGSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASV
VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQ
RLNLEALGMGRDTLVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIG
MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRL
VRQLCPVCKEERHEDGRTVWHPVGCAKCGHSGYAGRRGVYELLVIDDSIRSLIHRNAADAEILAAGRAEGMRTLRDDAER
WLASGATSLEEVLRVTGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-115 53
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-115 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_0080 YP_001763382.1 general secretory pathway protein E VFG0182 Protein 1e-123 56
Bcenmc03_0080 YP_001763382.1 general secretory pathway protein E VFG2048 Protein 8e-115 53
Bcenmc03_0080 YP_001763382.1 general secretory pathway protein E VFG1876 Protein 4e-116 52
Bcenmc03_0080 YP_001763382.1 general secretory pathway protein E VFG2426 Protein 1e-77 49
Bcenmc03_0080 YP_001763382.1 general secretory pathway protein E VFG0233 Protein 3e-86 49