|
Name : Bcenmc03_1786 (Bcenmc03_1786) Accession : YP_001765074.1 Strain : Genome accession: NC_010508 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1987261 - 1988013 bp Length : 753 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: rme:Rmet_5497 integrase, catalytic region DNA sequence : ATGCGAGCCCATCTCGGCGAGTTCCGCCTGTACTCGATGTGCCGGGTCCTTGGCGTGCATCGTAGCGGCTATTACGTCTG GCAGCGGCAGACAGTCGGGGCCCGCAAGCGTGAGGATGAGCGATTGCTCGGTCTGATCAAGCATGCGTGGCTGGCCAGCG GCGGCGTCTATGGCTACCGCAAGGTCACGATGGATTTGCGTGAATCGGGCGAAACGTGCAGCCGTCACCGCGTCCATCGC CTCATGAGAGGCGAAGGTCTGCGGGCAGAAGTGGGCTATGGCAGCAAGCCCCGCTATCGGGGTGGTCCGGTCGGCGTAAT CGCCAACGTGTTGAACCGTGAGTTCGCGCCAACCGCACCGAACCGGGTCTGGGTAACGGACATCACGTACATCCGGACCT ACGAGGGCTGGCTGTATCTGGCGGCTGTTATGGATCTGTACTCGCGCCAGATCGTCGGTTGGGCTACGCGCTCGACGATG ACCAGCGATCTGGTTTTACAGGCGCTGTTGGCTGCGGTTTGGAAACGCAAACCGGGACCCGGTGTCATGGTGCATTCCGA CCAGGGCAGTCAATTCACGAGCGATGACTGGCAGTCATTCCTGAAGGCACACCATATGGTGCCAAGCATGAGTCGGCGCG GTAATTGCCACGACAATGCCGTGGCCGAGAGCTTCTTCAGTGCCCTAAAGAAGGAGCGAATCAAGCGGCGCATCTATCCG GAGCCTATCCGAACCTTTGTGTGTGAGGCATAA Protein sequence : MRAHLGEFRLYSMCRVLGVHRSGYYVWQRQTVGARKREDERLLGLIKHAWLASGGVYGYRKVTMDLRESGETCSRHRVHR LMRGEGLRAEVGYGSKPRYRGGPVGVIANVLNREFAPTAPNRVWVTDITYIRTYEGWLYLAAVMDLYSRQIVGWATRSTM TSDLVLQALLAAVWKRKPGPGVMVHSDQGSQFTSDDWQSFLKAHHMVPSMSRRGNCHDNAVAESFFSALKKERIKRRIYP EPIRTFVCEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-33 | 48 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 8e-34 | 47 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 9e-37 | 42 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 2e-37 | 42 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 2e-37 | 42 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 2e-37 | 42 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 2e-37 | 42 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-37 | 42 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 2e-37 | 42 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-37 | 42 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 5e-38 | 42 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-35 | 42 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 4e-36 | 42 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 4e-36 | 42 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 9e-29 | 42 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 7e-29 | 42 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 7e-29 | 42 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 7e-29 | 42 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 7e-29 | 42 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 7e-29 | 42 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 9e-29 | 42 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 7e-29 | 42 |
| unnamed | CAC39293.1 | hypothetical protein | Not tested | LPA | Protein | 1e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bcenmc03_1786 | YP_001765074.1 | integrase catalytic subunit | VFG1706 | Protein | 9e-38 | 42 |
| Bcenmc03_1786 | YP_001765074.1 | integrase catalytic subunit | VFG1122 | Protein | 4e-29 | 42 |
