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Name : Swoo_0876 (Swoo_0876) Accession : YP_001759265.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1168730 - 1170721 bp Length : 1992 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCATCTCGTAAAGAACTCGCAAACGCTATCCGTGCGTTAACCATGGATGCCGTTCAAAAAGCCAATTCAGGTCACCC AGGTGCACCAATGGGGATGGCTGACATCGCTGAAGTGCTTTGGAATGATTTCCTTAAGCATAACCCGAATAACCCTGAGT GGGTTGATCGTGACCGTTTTATCCTATCAAACGGCCATGGCTCTATGCTTATCTACTCTTTGCTTCATTTGACTGGCTAT GCACTGCCTATCGAAGAGCTTAAAAACTTCCGTCAACTGCACTCAAAAACACCGGGTCACCCTGAATATGGTTACACGCC AGGTGTTGAAACTACGACAGGTCCATTAGGCGCTGGTATCAGTAATGCTGTGGGTATGGCGATTGCTGAAAAGACATTGG CTGCTCAGTTTAACCAGCCTGGCCACGATATCGTTGACCACTTCACATACTGCTTCCTAGGCGATGGTTGTTTGATGGAA GGTATCTCTCATGAAGCATGTTCACTAGCAGGGACCTTAGGTCTTGGTAAGCTAGTGGCGTTCTGGGATGACAACGGTAT CTCTATCGATGGCCATGTAGAAGGTTGGTTCACCGACGATACACCTAAGCGTTTCGAATCATACGGCTGGCATGTAATTG CTAACGTTGATGGCCATGATAGCGATGCTATCCGTGCTGCTATCGAAGAAGCTAAGTCTGTGACAGACAAGCCAACAATG ATCTGCTGCAAAACCACTATCGGTTTTGGTTCACCAAACAAGTCTGGCAGCCATGATTGTCACGGCGCACCATTAGGTGA TGCTGAGATTGCTGCTGCACGTGAATTCCTTGGTTGGAACCACGATGCATTCGAGATCCCAGAAAACGTATACGCAGGTT GGGACGCTAAAGAAGCGGGCCAAGCGAATGAGTCAAACTGGAACGATAAGTTCGCGGCATATGAAGCGGCTTTCCCTGAG CTAGCAGCTGAATATAAGCGTCGTGTGATCACGGGCGAACTACCAGCTGACTTTGAAGAGAAGGCACAGGCTTTCATTCA AGAGTCTCAAGATAAAGCGGAAGGCATTGCTAGCCGTAAAGCATCACAAAATGCGATTGGTGCATTTGGTGCAATTCTAC CTGAAATGCTAGGTGGCTCAGCAGACCTTGCTGGTTCTAACCTAACGCTTTGGTCTGGCTCTAAAGGTATTCAAGACGAT CCTGCTGGTAACTACATCTACTACGGTGTACGTGAATTCGGCATGAGCGGTATCATGAACGGTGCATCACTTCACGGTGG TTTCATCAATTATGGTGCAACGTTCATGATGTTTATGGAGTACGCACGTAACGCAGTACGTATGTCTGCATTGATGGGTA TCCAAAATATCTTCGTTTACACCCATGATTCAATCGGTCAAGGTGAAGATGGTCCAACTCACCAGCCAGTAGAGCAGCTT GCTAACCTACGTATGACACCAAACATGACTGTATGGCGTCCATGTGATGCGGCGGAAACTGCTGTATCTTGGAAGAGTGC AATCGAGCGCCGTACTGCGCCAACTTCGCTTATCTTTAGCCGTCAAGGTTTGAAAGCACAAGCGCGCACCGCTGAGCAGT TAGCAAATGTGGCTAAAGGTGGTTATGTACTGAGTGATTGCGCTGGTACGCCAGAGCTAATCCTTATTGCTACAGGCTCT GAAGTGCAACTGGCTCTTGATTCTGCTGCTGCACTGACAGAGCAAGGTAAGCAGGTTCGCGTTGTCTCTATGCCGTCAAC TAACGAGTTCGACAAGCAAGATGCAGCTTATAAAGAGTCTGTACTGCCACGTAGCGTTACTAAGCGCGTTGCAATCGAAG CGGCTCACGTTGATTTCTGGCACAAGTATGTTGGTTTCGACGGCGCGGTTGTTGGTATGACAACCTTCGGCGAATCAGCA CCAGGTGGTGATTTGATGAAGCACTTCGGTTTCACTGTTGAAAACGTCGTTGCTACAGTTAACGCTCTTTAA Protein sequence : MSSRKELANAIRALTMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPNNPEWVDRDRFILSNGHGSMLIYSLLHLTGY ALPIEELKNFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNQPGHDIVDHFTYCFLGDGCLME GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDDTPKRFESYGWHVIANVDGHDSDAIRAAIEEAKSVTDKPTM ICCKTTIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWNHDAFEIPENVYAGWDAKEAGQANESNWNDKFAAYEAAFPE LAAEYKRRVITGELPADFEEKAQAFIQESQDKAEGIASRKASQNAIGAFGAILPEMLGGSADLAGSNLTLWSGSKGIQDD PAGNYIYYGVREFGMSGIMNGASLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMTVWRPCDAAETAVSWKSAIERRTAPTSLIFSRQGLKAQARTAEQLANVAKGGYVLSDCAGTPELILIATGS EVQLALDSAAALTEQGKQVRVVSMPSTNEFDKQDAAYKESVLPRSVTKRVAIEAAHVDFWHKYVGFDGAVVGMTTFGESA PGGDLMKHFGFTVENVVATVNAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 74 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
