Gene Information

Name : Swoo_4777 (Swoo_4777)
Accession : YP_001763121.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : sodium/glutamate symporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0786
EC number : -
Position : 5765977 - 5767200 bp
Length : 1224 bp
Strand : -
Note : PFAM: sodium/glutamate symporter; KEGG: sse:Ssed_4386 sodium/glutamate symporter

DNA sequence :
ATGAGTACTGTTTATTCAATTGGTGAACTTGAGTCGTTTTTAGTGGCGATTTTGGTTCTGTTTATCGGGCATACGATTAA
TCGTCACGTGCCGTTATTTAAAAAATATAATATCCCAGAGCCTATTGTCGGCGGTCTTATCGTCGCCGCAGTGATCACTA
TACTGCACTTCAATCAGATCTCTATTCGCTTTACCCTCTCGATGCAGAACACCTTGATGTTGATGTTTTTCAGCACTGTG
GGTCTTGCTGCCAGCTATAAGTTGCTTCTCAAAGGCGGCACTAAGGTGTTTATGTTTTTGGGGGTCACCTCTCTGTTTAT
TCTTGTTCAAAATGCCGTGGGGGTCAGCATGGCAACGGCGTTAGGTCTAGAGCCTTTTATGGGGCTGATTGCCGGCTCCA
TCACACTCTCCGGAGGTCATGGAACAGGGGCGGCTTGGGCGCAAACCTTCTATGAAGACTATGGCGTCAATACGCTTGAG
TTTGCCATGGCCGCTGCAACATTTGGTTTGGTTATGGGGGGAATCATCGGTGGGCCAGTAGCCCAGAGGTTAATCAATAA
GAATAACTTAGTCTCCTCATATGGGGTGGGGGGCAACCACCATAAAGATCATCCTGAATTGGTAACCTATGATCAACTGG
AGGAGGATAGGGTTACGGCTAAGAGTATTCTTGAGGTGCTGTTTATTCTTCTGTTATGTGTCGCAGGAGCCAAATGGATA
GGAACGCTTATCTCCTATCTGGATATCAGTTGGCTGAAGATGCCTGAATTTGTCTATGCACTTTTTCTCGGTGTGGTGAT
TGCGAATATTACAGAGCTTTCCCATGGCTATAAGATCAAGAGTGAGAGTGTTGATGTATTGGGTACAGTCTCTTTGTCAC
TGTTTTTGTCCATGGCCTTGATGAATCTTAAGCTGTGGGAGATATTCGATCTTGCCCTGCCTCTGCTCGCTATCTTGTTG
GTGCAAACACTGACGCTAGCGCTGTTTGCTTACTTCATTACCTTTAGATTTATGGGAAGTAACTATGATGCTGCTGTGAT
GGTCGGAGGCCACTGTGGCTTCGGTATGGGAGCAACGCCTACAGCGGTGATGAACATGGGCGCGCTCGTCTCCAGAACTG
GCCCTTCGCCTCAAGCCTTTATGGTGGTGCCTATTGTGGGGGCTTTCTTTATCGATATCGTCAATGCCATTATTTTGAAA
GGCTACCTCAGCTTTATCGGCTAA

Protein sequence :
MSTVYSIGELESFLVAILVLFIGHTINRHVPLFKKYNIPEPIVGGLIVAAVITILHFNQISIRFTLSMQNTLMLMFFSTV
GLAASYKLLLKGGTKVFMFLGVTSLFILVQNAVGVSMATALGLEPFMGLIAGSITLSGGHGTGAAWAQTFYEDYGVNTLE
FAMAAATFGLVMGGIIGGPVAQRLINKNNLVSSYGVGGNHHKDHPELVTYDQLEEDRVTAKSILEVLFILLLCVAGAKWI
GTLISYLDISWLKMPEFVYALFLGVVIANITELSHGYKIKSESVDVLGTVSLSLFLSMALMNLKLWEIFDLALPLLAILL
VQTLTLALFAYFITFRFMGSNYDAAVMVGGHCGFGMGATPTAVMNMGALVSRTGPSPQAFMVVPIVGAFFIDIVNAIILK
GYLSFIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gltS NP_273147.1 sodium/glutamate symport carrier protein Not tested IHT-A Protein 4e-68 46
unnamed AEA34672.1 sodium/glutamate symport carrier protein Not tested Not named Protein 7e-60 43