Gene Information

Name : Swoo_4731 (Swoo_4731)
Accession : YP_001763076.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 5708588 - 5709022 bp
Length : 435 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: spl:Spea_0147 general secretion pathway protein G

DNA sequence : 
ATGCAAGCAAGAAAAAAACAGCAAGGTTTTACCCTACTCGAAGTGATGGTTGTGATCGTTATTTTGGGTATTCTGGCCTC
TATGGTTGTACCTAACCTTATGGGCAACAAGGATAAAGCCGATATTCAAAAAGCTATCTCAGACATTGTGGCGTTAGAGA
ACTCTTTGGATATGTATAAGTTGGACAACAGCATCTATCCAACGACTGAGCAGGGGCTTGAAGCCTTGACTCAAAAGCCT
ACTGGTTCACCTGAGCCACGTAACTACCGCGAAGATGGCTATGTGAAGCGTCTGCCACAAGATCCGTGGAGAAATGACTA
CCTGCTATTGAGCCCAGGTGAGAACGGTAAAATTGATATCTTCAGTGCAGGTCCTGATGGTCAGGCTGGTACGGAAGATG
ATATCGGAAACTGGAATCTACAGAACTTTCAGTAA

Protein sequence : 
MQARKKQQGFTLLEVMVVIVILGILASMVVPNLMGNKDKADIQKAISDIVALENSLDMYKLDNSIYPTTEQGLEALTQKP
TGSPEPRNYREDGYVKRLPQDPWRNDYLLLSPGENGKIDIFSAGPDGQAGTEDDIGNWNLQNFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 6e-45 69
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-45 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swoo_4731 YP_001763076.1 general secretion pathway protein G VFG2050 Protein 2e-45 69
Swoo_4731 YP_001763076.1 general secretion pathway protein G VFG0180 Protein 3e-35 56
Swoo_4731 YP_001763076.1 general secretion pathway protein G VFG1871 Protein 1e-33 53