Gene Information

Name : Swoo_4592 (Swoo_4592)
Accession : YP_001762937.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 5564715 - 5566790 bp
Length : 2076 bp
Strand : +
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
TTGAATAGACTCGATCTTGTTCCTGTCACTGAACTTAATGGTGTTGCCAAAAAAATGGCTGAACGCTTAGCTAAGCTCGG
CATAAACACAGTACAAGATCTCCTGTTTCACCTACCACTTCGATATGAAGATCGCACCCAGATCTATCCCATCGCCTCAC
TTTATCCCGGAAGCTACGGCACCATAGAAGCCGTGATCCAATCAAGCCAGATTGTTCAAGGCCGCAAACGCATGATGACC
TGCACAGTGCGTGATGATACTGGCTCAATGGTACTAAGATTTTTTAACTTCTCCATGGCTCAGAAAAACGGCCTGCAAAA
TGGCACTCTTATCCGTGCTTATGGTGAGATCCGCCGTGGAAAACAGCAACCAGAGATCATACATCCGGAATACAAGCTGG
TCAGTGAATATGACTCTGCAGCCCTCAGTGATACCTTAACCCCTGTGTATCCAACAACCGAGGGACTAAAACAAGCCAGC
TGGATCAAGTTAACCGATCAGGCCCTGTCACTGCTGGAAAATGGCGGCCTGCAGGAACTACTTCCACCCCAGCTTCAGCC
CAATAATTTAAGTTTGAAAGAGGCGCTGCAACTGCTGCATCGCCCCCACACTGGCGTGGCCCTGTTTGAGCTTGAGCAGG
GAAACCACCCTGCGCAACAGCGGCTCATTCAAGAGGAACTACTGGCCCATAACCTCAGTATGTTGAAGCTAAGACAGCGT
AGTAATCAAGATAACGCCATCTCTATGCCTGCCACAGGACAACTGCTCAACCCTTTTCTGAAAGAGCTTCCTTTTAAACC
CACTGGCGCTCAGCAAAGAGTAGGCGCGGATATCTGCCGCGATCTTGAAAAACCATCACCCATGATGCGTCTTGTTCAAG
GAGATGTGGGATCAGGAAAAACCTTAGTGGCAGCTCTCGCCGCACTACAGGCGATCGAAAATGGCTATCAAGTTGCCATG
ATGGCGCCCACTGAACTGCTTGCCGAACAGCACGCCATTAATTTCAGCCAATGGTTTGAACCGTTAGGCCTAAAAGTTGG
CTGGTTAGCGGGAAAACTTAAGGGCAAAACAAGAGCTCAATCCTTAGCTGATATAGAAAGTGGCGATGCCCATATGGTGA
TCGGTACTCATGCTATTTTCCAAGATAAGGTGATCTTCAATAAGCTGGCGCTGATTATCATAGATGAGCAGCACAGGTTC
GGAGTGCATCAGCGTTTGGGGCTCAGAGAGAAAGGGATAAGCCAAGGGTTCCACCCACATCAGCTGATCATGACCGCCAC
TCCGATCCCCCGCACCTTAGCGATGACAGCCTACGCCGATCTCGATACCTCAGTGATCGATGAGCTGCCACCGGGACGCA
CACCAGTCACAACCGTTGCCGTATCGGATGTTCGCCGCAGCGAAGTGATTGAACGTGTTAGACAAGCGGTGACCAATGAT
GGCAGACAAGTTTACTGGGTCTGCACCCTTATTGATGAGTCTGAAGTGCTTGAGTGTCAAGCAGCGGAAGATACCGCTGC
CGAGCTTTCGATTGCTCTGGCCGAGCTAAAAATAGGTTTAGTTCATGGCCGAATGAAGTCCGCTGAAAAACAAGCTGTCA
TGGCCGAATTTAAAGCCGGAAACCTTAACTTATTGGTCGCTACAACCGTGATCGAAGTGGGCGTAGATGTGCCAAATGCC
AGCTTGATGATAATAGAGAACCCTGAGCGACTAGGACTGGCGCAGCTCCACCAACTAAGAGGCCGTGTCGGTCGAGGCTC
TATCGCCAGTCACTGTCTACTTATGTATAAAGCCCCTCTGTCTCAGATGGCCACAAAGCGTCTAGGTGTACTCAGGCAGA
GCAATGATGGCTTTATTATCGCACAGAAAGATCTTGAGATAAGGGGCCCAGGCGAAGTACTCGGCACTAAACAAACTGGG
GTGGCAGATATGAAAATTGCCGATCTGATCCGCGACCAATCACTCATTCCCCATATTCAAAAGCTAGCCGTTCATGTGAT
GGAGCAAGCTCCCGATAATGTCGATGGCATAGTGCAGCGTTGGCTTGGGGAGCGTGAGCAGTATGTACAGGCCTAA

Protein sequence :
MNRLDLVPVTELNGVAKKMAERLAKLGINTVQDLLFHLPLRYEDRTQIYPIASLYPGSYGTIEAVIQSSQIVQGRKRMMT
CTVRDDTGSMVLRFFNFSMAQKNGLQNGTLIRAYGEIRRGKQQPEIIHPEYKLVSEYDSAALSDTLTPVYPTTEGLKQAS
WIKLTDQALSLLENGGLQELLPPQLQPNNLSLKEALQLLHRPHTGVALFELEQGNHPAQQRLIQEELLAHNLSMLKLRQR
SNQDNAISMPATGQLLNPFLKELPFKPTGAQQRVGADICRDLEKPSPMMRLVQGDVGSGKTLVAALAALQAIENGYQVAM
MAPTELLAEQHAINFSQWFEPLGLKVGWLAGKLKGKTRAQSLADIESGDAHMVIGTHAIFQDKVIFNKLALIIIDEQHRF
GVHQRLGLREKGISQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAVSDVRRSEVIERVRQAVTND
GRQVYWVCTLIDESEVLECQAAEDTAAELSIALAELKIGLVHGRMKSAEKQAVMAEFKAGNLNLLVATTVIEVGVDVPNA
SLMIIENPERLGLAQLHQLRGRVGRGSIASHCLLMYKAPLSQMATKRLGVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTG
VADMKIADLIRDQSLIPHIQKLAVHVMEQAPDNVDGIVQRWLGEREQYVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 7e-103 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swoo_4592 YP_001762937.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59