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Name : rph (Swoo_4568) Accession : YP_001762913.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 5538084 - 5538797 bp Length : 714 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGCCCAAATGACAGAACGCCAGCACAATCTCGCCCAGTGACAATTACACGTCAGTTTACAGCCCATGCTGAAGGCTC TGTTTTGGTAGAGTTTGGCGAAACTAAAGTGCTGTGTACTGCAAGTTTCACCGAAGGGGTGCCACGTTTTCTAAAAGGAA AAGGCCAAGGTTGGGTAACGGCTGAATATGGCATGTTGCCTCGTTCTACTCATAGCCGCATGGATCGTGAAGCGGCTCGC GGTAAGCAGTCTGGCCGTACTCAAGAGATCCAACGTCTTATTGGTCGCTCTCTTCGTGCAGCTGTGGATATGAAGGCACT TGGTGAAAATACCATAGTGATCGATTGTGATGTGATTCAAGCCGATGGCGGTACGCGTACTGCAGCGATTACAGGTGCCT GCGTTGCGCTAGTTGATGCGCTAAACTGGGCTCGTGGCAAAGGTATTTTGAAGAATAACCCACTTAAGTTCCTGATTGCC GCGGTTAGTGTTGGTATCTATAAAGGTGAGCCTATCTGTGATCTCGAATATATCGAAGATAGTGAAGCTGAAACCGATAT GAATGTCGTGATGACAGAAACTGGCAAGATGATCGAGATTCAAGGTACCGCTGAAGGTGAGCCGTTTAGCCATGAAGAGC TTCTTAGCTTGCTTGAGCTGGCTAAGCACGGTATTCGTGAGATTGTTGATGTACAGAAAGCTGCATTGAGCTAA Protein sequence : MRPNDRTPAQSRPVTITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGKGQGWVTAEYGMLPRSTHSRMDREAAR GKQSGRTQEIQRLIGRSLRAAVDMKALGENTIVIDCDVIQADGGTRTAAITGACVALVDALNWARGKGILKNNPLKFLIA AVSVGIYKGEPICDLEYIEDSEAETDMNVVMTETGKMIEIQGTAEGEPFSHEELLSLLELAKHGIREIVDVQKAALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 4e-60 | 58 |
