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Name : murD (Swoo_4535) Accession : YP_001762880.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 5499046 - 5500374 bp Length : 1329 bp Strand : - Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGGAAAATATTAAGTCACATGTAGTTTTAGGGCTGGGAGCAACTGGGCTTTCGGTTGTGCACTATCTGCATGAGCAGGG GATCACTCCTTTGGTGATGGATAGCCGTCATCAACCTCCAGGCATGGATGAACTCAAGCGTTTATATCCAGAGGTTGAGT TGCTGACTGGCGGTTTTGATTGTCGTTATCTCGTGCAAGCCAGTCAAATTATTATCAGTCCTGGTATTGCCGTTGATACG CCTGAGATCCGTGCGGCTATCGATATGGGTATTGAAGTTATTGGGGATGTGGAGTTATTTGCCCGAGCGGTTAAGGATAG AGAGCCCTGTGTAATAGGTATTACCGGTTCAAATGGTAAGTCTACAGTGACCACATTAGTTGGTGAGATGGCGAGGGTAG CAGGTCTCAACTATGCAGTTGGTGGCAATATCGGTGTTCCCGCACTCGATCTGCTTAGAGAGCCAAGAGATCTCTATATT CTAGAACTCTCTAGTTTCCAGCTCGAGACTACGCACAGTTTAAATTGCATCGTGGCGACCTGTCTCAATATTAGTGAAGA TCATATGGATCGTTACACAGATCTTGAGGCTTACAGGCAAGCAAAACTGTCACTCTATTGCCAAAGTAAACGTGCGCTGT TTAATCGAGAAGATGAACTGACCGAGCCAAAAGATCCGATGAATCAAAATAGTTTTGGATTGTCGGCACCATTTAATGAT GAGTGGGGTGTTCGTGATGGCAAGGTTGTGCATGGAACAACAGAGATCATGAACCTGCTTGATGTTGCGCTTGTTGGTAG CCATAACCATGCTAATCTGCTTGCCGCTATGGCACTGGCTTATCATGCCGGAGTCGATAAAGAATCGATGATACAGGTTG CGACGACCTTTACTGGTTTAGCACATCGATGTGAATTGGTGGCTGTTCATAATGGCGTCAGTTATGTCAACGACTCTAAG GCTACTAATGTCGGCGCAACTGTTGCTGCACTTGAAGGGTTTAGTGATCATCTTGGTGGCATTATTTTAATTGCGGGTGG AGATGGAAAAGGCGCTGATTTTCAGCCATTGCAGCAGGCTATTCATGGGCTTTCTCAACTGATCACATTAGGAAAAGATG GCGATAAAATTGCTGAGTTTTCTGAGAAAGCTATCCGAGTTAGCGATATGTCTGAGGCGGTAAAAACAGCGAATGAACTT GCCGAGGCTGGAGATATTGTATTGATGTCGCCTGCTTGTGCGAGCTTAGATATGTACAAAAACTTTATGGCTCGTGGCGA AGATTTCAGAGCAGAGGTGAATGCATTAGCTGGAAGCTCTGATGCGTAG Protein sequence : MENIKSHVVLGLGATGLSVVHYLHEQGITPLVMDSRHQPPGMDELKRLYPEVELLTGGFDCRYLVQASQIIISPGIAVDT PEIRAAIDMGIEVIGDVELFARAVKDREPCVIGITGSNGKSTVTTLVGEMARVAGLNYAVGGNIGVPALDLLREPRDLYI LELSSFQLETTHSLNCIVATCLNISEDHMDRYTDLEAYRQAKLSLYCQSKRALFNREDELTEPKDPMNQNSFGLSAPFND EWGVRDGKVVHGTTEIMNLLDVALVGSHNHANLLAAMALAYHAGVDKESMIQVATTFTGLAHRCELVAVHNGVSYVNDSK ATNVGATVAALEGFSDHLGGIILIAGGDGKGADFQPLQQAIHGLSQLITLGKDGDKIAEFSEKAIRVSDMSEAVKTANEL AEAGDIVLMSPACASLDMYKNFMARGEDFRAEVNALAGSSDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 2e-61 | 45 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 2e-61 | 45 |
