Gene Information

Name : Swoo_4387 (Swoo_4387)
Accession : YP_001762734.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 5313926 - 5314273 bp
Length : 348 bp
Strand : -
Note : PFAM: regulatory protein ArsR; KEGG: sse:Ssed_0574 transcriptional regulator, ArsR family

DNA sequence :
ATGACAGCTCTGGATCTGTTTAAAGCGCTTAGCGATGAAACTCGCTTACGCAGTTTGTTATTGATTAAAGCGGAGCAGGA
GCTCTGTGTGTGTGAATTGATGCAGGCATTGGAGGAGAGTCAACCAAAGGTTTCTAGGCATTTAGCTCAGCTTCGCAAGG
CTGGGTTACTGCTAGATAAACGTCAGGGGCAGTGGGTGTTTTATCGAATTAATCCGAGCCTACCTATTTGGGCGCTGAAG
GTGGTTGAGGAAACCTTTTTAGCCAACGGTGAGCTGATAGAGTCGAATTTGACTCGTTTGAAACAGATGGGTGATAGACC
CGATCGCGTAAAAAGCTGCTGCGACTAG

Protein sequence :
MTALDLFKALSDETRLRSLLLIKAEQELCVCELMQALEESQPKVSRHLAQLRKAGLLLDKRQGQWVFYRINPSLPIWALK
VVEETFLANGELIESNLTRLKQMGDRPDRVKSCCD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 2e-20 52
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 2e-20 52
arsR2 YP_001007630.1 DNA-binding transcriptional repressor ArsR Not tested YAPI Protein 7e-23 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swoo_4387 YP_001762734.1 ArsR family transcriptional regulator BAC0591 Protein 5e-23 52
Swoo_4387 YP_001762734.1 ArsR family transcriptional regulator BAC0589 Protein 2e-23 49
Swoo_4387 YP_001762734.1 ArsR family transcriptional regulator BAC0594 Protein 3e-22 46
Swoo_4387 YP_001762734.1 ArsR family transcriptional regulator BAC0588 Protein 5e-20 42