Gene Information

Name : Swoo_4251 (Swoo_4251)
Accession : YP_001762602.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Virulence
Product : glycosyl transferase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 5150274 - 5151293 bp
Length : 1020 bp
Strand : -
Note : PFAM: glycosyl transferase family 2; KEGG: sse:Ssed_0713 conserved hypothetical glycosyl transferase

DNA sequence :
ATGGCGCAGATAAAATCAATTAATCCAAGTGATGGTCAGATATGTCTTTCCATTATTATCCCTGTTTACAATGAGGCCGA
GGTACTTCCCCCTCTTATTGCTCGTTTAAGTCGAGTGTTATCAAGTATTCCTGAGTCTGCTGAGATTGTGTTCATCGATG
ATGGAAGTTGTGATAACACTTGGGAGTTACTGCAACAGCTACCCGTTAACTCCTGTGAACATCAGTGTATCCGTTTAAGT
CGAAACTTTGGCAAAGAGGCGGCGATGACTGCTGGGTTAGAGCAAGCCAGAGGATTAGCTGTGATCTTGCTTGATGCGGA
TCTTCAAGATCCTCCTGAGTTGATCCCACAGATGCTTGAAGCATGGCGCTCAGGCTTTGATGTGGTCAATATGAAACGGA
AAAAGCGTTTGGGTGAGTCTTGGTTTAAGCGTTTTTCTGCCGCCGCTTTCTATCGGATCATTAATGGGATGGCGGAGTCT
CCAGTTCCTGAAAATGTAGGGGACTTTCGATTGCTCAGTCGTCAGGTTGTGGACTGCATTAACTCCCTGCCAGAAAGAAA
TCGATTTATGAAAGGGATATTGAGTTGGCCAGGTTTTTCTCAAACGGAGATATTGTTCGATCGTGATCCTCGTTATTTGG
GAGAGACGAAATGGAACTACAGTAAACTCGTCGGATTGGCGATGGATGGCATCACCTCTTTTAGTATTAAGCCTCTGCGT
TTGGCCACTTGGGCTGGAATACTCACCGCGCTATCGGCATTCACCTATGGTGGCTGGGTACTTTTAAAGACGATGTTATG
GGGAGAGACCGTGGTGGGCTATCCCTCATTGATGATTGTTCAGGTGGCGCTAGCTGGTGTTCAGCTACTGGCTTTGGGAT
TGATTGGTGAGTACTTAGGCAGGGTGTTTATGGAAGTAAAACAGAGGCCTATCTATCTTATCAGCGAGGTGGAGCACAAA
GGTAGCCGAAGCCAAAATGAGGCGGGAGATAAGGTCCGTTATCTGGAGTCTATGGGATGA

Protein sequence :
MAQIKSINPSDGQICLSIIIPVYNEAEVLPPLIARLSRVLSSIPESAEIVFIDDGSCDNTWELLQQLPVNSCEHQCIRLS
RNFGKEAAMTAGLEQARGLAVILLDADLQDPPELIPQMLEAWRSGFDVVNMKRKKRLGESWFKRFSAAAFYRIINGMAES
PVPENVGDFRLLSRQVVDCINSLPERNRFMKGILSWPGFSQTEILFDRDPRYLGETKWNYSKLVGLAMDGITSFSIKPLR
LATWAGILTALSAFTYGGWVLLKTMLWGETVVGYPSLMIVQVALAGVQLLALGLIGEYLGRVFMEVKQRPIYLISEVEHK
GSRSQNEAGDKVRYLESMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-50 47
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swoo_4251 YP_001762602.1 glycosyl transferase family protein VFG0670 Protein 1e-50 46