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Name : Swoo_4186 (Swoo_4186) Accession : YP_001762537.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 5090290 - 5091870 bp Length : 1581 bp Strand : - Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: sbn:Sbal195_3908 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor DNA sequence : ATGAGACAAAATTTACCTGTCACTCAGAAAAATTATGATTACCCAGCAGATTGGATACTACTTTCGACTACTGATACCAG TAGTATCATAAAATATGCAAATCCGTCATTTTGTGAAGTTGCTGGTTACCAGTTAGATGAAATGGTTGGCGAACCTCATA ATATGGTGCGCCACCCTGATATGCCGCCAGCAGCCTTCGAAGATATGTGGACAACTATCAAAGGCGGTCACCCTTGGAAG GGGATGGTTAAAAATCGTTGTGCCAATGGCGATCATTACTGGGTTGATGCTTTTGTTACTCCGATCTCAGAAGGCGGAAA GGTCGTAGAGTATCAATCTGTTCGAACTAAGCCTTCATCTGAACAGATAACCCGAGCAGAAGAGTCCTATAAAGAGCTTA ACGAGAAGGGCAGCATTGCCAAGCTAAAGCGTGTTATGAGCTTGCCGAATAAAATTATGGCCCTTTCGGTGATTGCATTG CTACCTATGCTATATATTGCGCTTCAATCTGGATTACTCGGAATAGGCCTGTTTGTCGTAACAGCACTCGTGTTGCTTCT TGGTTTAAATATGCTGTTTTCAAGGTATAAAGCAATCGTTGATCATTGTAAGGCTATTTACACTAGTCCCTTAATGTCCT ACCTATATACTGGCCATACAGATGATATAGCCCAAATTGAATTAGCATTGAGAATGCAGTCATCTGAGATGAAAGCGATG TTAGGTCGTGCTCTTGACTCCTGTGAGCAGTCTGCATGTAAAGCAAGTGAATCTGTGACTAAGGGGGAGGAAGTGAAAAA TAACAGTGACTCCTTAACTCGTGAGGTTGAACAGGTTGCAACGGCGATGCAAGAGATGACCGCGACTTTAGGTGATATGG CTTCAAACTGTTCAGATGCTGCTAACTCATCTCAATCTGCCTCTGATGAAGCAAATGCAGGTGATGCTATTGTGACTCAA ACAATATCTTCAATAGAGTTAATGTCTTCCCAGCTCACTGAAACATCATTAGTCATTAAAGATTTGGAGGAGCAGAGCAA AGGGATTGGAACGGTTTTAGACGTGATCCAAAGTATTGCAGAGCAAACAAATCTACTGGCATTAAATGCTGCCATTGAGG CTGCAAGGGCCGGTGAGCAAGGTCGTGGTTTTGCGGTTGTTGCTGATGAAGTACGAGCACTGGCCAAACGAACTCATGAT TCAACAACTGAGATTCAGAATATGATTAATCTGCTGCAGCAGGGAACAGAAAAAGCTGTGCAGAGTATGCATCAAGGTGC AGATTCAGCTTCACAATGTGTTGATCAAGCGGCTCAAGCGGGTAATGCATTGAGGACAATTAAAGAGGCTATTACCTCTA TTTCAGATATGACTCACCATATCGCCAGTGCAGTTGAGGAGCAATCAAGCGTCTCTAATGAGGTGAATCGCAGTATGGTT AACATCTCTCAACTGAATGGCTCATCCAATGATTTAGGCGATGAGATGATAGGTTTAAATCATGTAGTGGTGACCAATAT TAACTCGCAGAAGGCCTTGGTAGAGCAGTTCCTTAAACGGAGTCAGAAGCAAGCTTTATAG Protein sequence : MRQNLPVTQKNYDYPADWILLSTTDTSSIIKYANPSFCEVAGYQLDEMVGEPHNMVRHPDMPPAAFEDMWTTIKGGHPWK GMVKNRCANGDHYWVDAFVTPISEGGKVVEYQSVRTKPSSEQITRAEESYKELNEKGSIAKLKRVMSLPNKIMALSVIAL LPMLYIALQSGLLGIGLFVVTALVLLLGLNMLFSRYKAIVDHCKAIYTSPLMSYLYTGHTDDIAQIELALRMQSSEMKAM LGRALDSCEQSACKASESVTKGEEVKNNSDSLTREVEQVATAMQEMTATLGDMASNCSDAANSSQSASDEANAGDAIVTQ TISSIELMSSQLTETSLVIKDLEEQSKGIGTVLDVIQSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTHD STTEIQNMINLLQQGTEKAVQSMHQGADSASQCVDQAAQAGNALRTIKEAITSISDMTHHIASAVEEQSSVSNEVNRSMV NISQLNGSSNDLGDEMIGLNHVVVTNINSQKALVEQFLKRSQKQAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-79 | 43 |
