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Name : Swoo_4145 (Swoo_4145) Accession : YP_001762496.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Resistance Product : acriflavin resistance protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 5041562 - 5044627 bp Length : 3066 bp Strand : + Note : PFAM: acriflavin resistance protein; KEGG: vvy:VV1397 transporter, AcrB/D/F family DNA sequence : ATGAAACAGAATATCGCCACATACTTCATAAAAAACAGCGTAATAAGCTGGATGATGACACTGATTTTTCTTATTGGTGG CACAGTCTCATTCTTTGGCCTCGGAAGGTTGGAAGATCCCGCTTTTACCATTAAAGATGTCATGATCGTCACCGCTTATC CCGGGGCGACACCTCAACAGGTCGAAGAGGAGGTAAGCTACCCTCTAGAAAAAGCAGTCCAACAACTGGTCTATGTCGAC AAGGTACAGTCGATCTCAAGCCGAGGCCTGTCGCAAATAACCGTTAGCATGAAAAACAATTATGGCCCAGACGATCTCCC TCAGATCAAAGATGAGATGCGCCGTAAAGTCAATGACATCAAAGAGACTCTACCACCTGGGGTCAATACACCTCAGGTTT TAGATGATTTTGGTGATGTTTATGGCGTCCTACTTGCCGTCACTGGTGATGGTTACGCTTACTCAGAGCTCAAAGATTAT GTCGACTACTTAAGGCGAGAACTTGAGCTCGTAGATGGCGTGGGCAAAGTACAGGTATCAGGCGTTCAACAGGAGCAGGT CTTTATCGAAATTTCGATGCAGCGGCTCAGTAACTTAGGGATCTCTCCTCAAACACTGTTTCAACTGCTCGAAACCCAGA ATACTGTCACCAACGCCGGTGCAATCCGCATCGGTAGTGAATATATCCATATTCAAACCACAGGGGAGTTCCAGTCGGTA CAGGAACTTGGCAACCTTATCATCAACAACTCAGGTACTGAGGGGTTAATATACTTAAGAGATGTTGCTGATATTAAGAG AGGTTATCAGGAGGTCCCCTCTAATCTAGTGACCTACAACAACAGACTCGCGCTCAACCTAGGGATCTCCTTTGCAAATG GAGTCAATGTTGTTGAGATAGGAAAAAGTGTCGATCGAAGGCTAGATGAGCTGAGAGAATTTCAGCCCATAGGTATCGAT ATTGGCCGAGTTTACAATCAACCTTCTGAGGTCGATGGCTCTGTACAAGGCTTTGTCGTCAGTCTAGGTGAAGCCGTTGC GATCGTTATCGTAGTGCTTTTACTGTTTATGGGCTTAAGATCTGGCCTGTTGATCGGTTTAATTCTTCTATTAACCGTAT TAGCCACCTTTATCTTTATGCGGTATTTCAATATTGACCTGCAAAGGATCTCCCTTGGGGCACTGGTGATCGCATTGGGA ATGCTGGTAGATAACGCCATTGTCGTCGTCGAAGGTATCTTAGTCGGCCTTAAAAAAGGTCGCACACGCTTAGAAGCTGC TTCCGATATCGTTACCCAAACACGTTGGCCTCTTCTGGGCGCAACCGTAATAGCCGTGACAGCTTTTGCGCCTATTGGTC TATCGGATGATGCCACCGGTGAGTACTGTGGCACCTTATTCTCTGTGCTATTAATCTCACTAATGATGAGCTGGTTTACC GCCATTACTCTGACGCCATTTTTCGCCAACCTATTTTTCAAAGAGGAGCCAGCAAGCGATAATGATCAAGAGTACGATCC CTATCAAGGTGTCATATTTGTCATCTATAAGCGCTTTTTAGAGCTCTGTATTCGCCGAGCTTATCTCACCTGTGCAGTGC TCATTGTCGCATTAGTCAGCTCAATCTATGGCTTTAGCTTTATCAAACAGGCTTTCTTCCCCTCCTCCACCACTCCAATG TTTATTGTCGATATCTGGATGCCAGAAGGCACAGATATCCATGCGACATCGGAGAAACTGGCTGAGCTAGAAAACTGGAT GCTAAAGCAAGATGAGATCGAATATGTCACCACCAGCTCTGGTGCGGGTAATCAGCGATTTATGCTGACCTATACGCCGG AAAAAAGTTACTCGGCCTACGGTGAGCTTATTGTCCGCACAGACAGTTATCAGAGTGTCTTACCTAACATGGAAAAGATA CGTACAGAAATGAACAAGAACCATCCAGAGATTCAATACAAACTCAAACGGGTGGAATTAGGTCCATCAGCGGGCTCTAA AATTGAAGCGAGAATTATTGGTTCAGATCCACAAGTTTTACGCACCATAGCGGCGCAATATGCCGCCGTGATCAAAGCCG ATCCTCAAGCTGTTAATATTCGTCATGACTGGCGTGAGCGTACTAAGTTAATTGAGCCTCAATTTAACGAGAGTCAAGCC AGACGTTACGGCATTACTAAGCAAGATGTCGATAACCTGCTAGAGATGACCTTTTCTGGGCGCTCAGTAGGGCTATATCG AGACGGTACCTTGCTAATGCCTATTGTTGCTAGGCTACCTCAAGAGGAGAGAGTCGATGTAAATACTATCGAGGGAATTA AGATCTGGAGCCCATCGCTGCAACAGTATGTTCCTCTGCAACAGGTCACACTAGGTTACACCATGGCCTGGGAAGATCCC ATCATAGTGCGTAAAAACAGAAAACGTATGTTAACAGTAGCCGCAGATCCCGATCCTCTTGGCGACGAGACCGCCGCCAG CTTACAGGCAAGGATCCAGCCTCTGATCGAGCAGATAGAGCTTCCAAAGGGATACTCTCTGGAGTGGGGCGGTGAATATG AGTCTTCAGGAGATGCACAAGCATCTCTATTCAGCTCGCTGCCTATGGGTTATCTGTTTATGTTTTTAGTCACCATATTG CTATTTAACTCGGTCAAAGACTCGTTAATTGTCTGGATGACTGTCCCATTGGCGATTATCGGTGGTACTGCTGGCCTTCT GGCACTCAATACACCATTTGGGTTTATGGCGCTGCTGGGATTCCTTAGCCTAACAGGGATGTTGATTAAAAACGGCATAG TCTTAGTCGATCAGATCAATATCGAGCTCAAAGAGGGTAAAGACGCCTATCAAGCTGTTGTCGATGCAGCGGTGAGCCGT GTTAGACCAGTGTGTATGGCAGCCATCACTACCATACTGGGTTTGCTGCCACTGCTCCCTGATGTGTTTTTCCGTCCCAT GGCGGTCACCATCATGTTCGGTCTTGGCTTCGCAACGGTCCTAACATTGATCGCCGTCCCGGTGTTTTATCGCTTAGTTT ACAGGGTGGAATGCCCAACGAACTAA Protein sequence : MKQNIATYFIKNSVISWMMTLIFLIGGTVSFFGLGRLEDPAFTIKDVMIVTAYPGATPQQVEEEVSYPLEKAVQQLVYVD KVQSISSRGLSQITVSMKNNYGPDDLPQIKDEMRRKVNDIKETLPPGVNTPQVLDDFGDVYGVLLAVTGDGYAYSELKDY VDYLRRELELVDGVGKVQVSGVQQEQVFIEISMQRLSNLGISPQTLFQLLETQNTVTNAGAIRIGSEYIHIQTTGEFQSV QELGNLIINNSGTEGLIYLRDVADIKRGYQEVPSNLVTYNNRLALNLGISFANGVNVVEIGKSVDRRLDELREFQPIGID IGRVYNQPSEVDGSVQGFVVSLGEAVAIVIVVLLLFMGLRSGLLIGLILLLTVLATFIFMRYFNIDLQRISLGALVIALG MLVDNAIVVVEGILVGLKKGRTRLEAASDIVTQTRWPLLGATVIAVTAFAPIGLSDDATGEYCGTLFSVLLISLMMSWFT AITLTPFFANLFFKEEPASDNDQEYDPYQGVIFVIYKRFLELCIRRAYLTCAVLIVALVSSIYGFSFIKQAFFPSSTTPM FIVDIWMPEGTDIHATSEKLAELENWMLKQDEIEYVTTSSGAGNQRFMLTYTPEKSYSAYGELIVRTDSYQSVLPNMEKI RTEMNKNHPEIQYKLKRVELGPSAGSKIEARIIGSDPQVLRTIAAQYAAVIKADPQAVNIRHDWRERTKLIEPQFNESQA RRYGITKQDVDNLLEMTFSGRSVGLYRDGTLLMPIVARLPQEERVDVNTIEGIKIWSPSLQQYVPLQQVTLGYTMAWEDP IIVRKNRKRMLTVAADPDPLGDETAASLQARIQPLIEQIELPKGYSLEWGGEYESSGDAQASLFSSLPMGYLFMFLVTIL LFNSVKDSLIVWMTVPLAIIGGTAGLLALNTPFGFMALLGFLSLTGMLIKNGIVLVDQINIELKEGKDAYQAVVDAAVSR VRPVCMAAITTILGLLPLLPDVFFRPMAVTIMFGLGFATVLTLIAVPVFYRLVYRVECPTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 3e-180 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_4145 | YP_001762496.1 | acriflavin resistance protein | BAC0428 | Protein | 0.0 | 75 |
| Swoo_4145 | YP_001762496.1 | acriflavin resistance protein | BAC0519 | Protein | 0.0 | 74 |
| Swoo_4145 | YP_001762496.1 | acriflavin resistance protein | BAC0526 | Protein | 0.0 | 58 |
| Swoo_4145 | YP_001762496.1 | acriflavin resistance protein | BAC0425 | Protein | 1e-180 | 43 |
