|
Name : Swoo_4072 (Swoo_4072) Accession : YP_001762423.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Resistance Product : ABC transporter-like protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 4943993 - 4944754 bp Length : 762 bp Strand : - Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3722 ABC transporter related DNA sequence : ATGTTATCGATGAAAAGTATCAGTAAAGTATTTAAAACGGATTTAGTAGAGACCCATGCGCTACGAGATTTTAATTTAGA GGTGAATGAGGGAGAGTTTGTGGCGGTAACTGGGCCATCGGGATCAGGTAAAACGACCTTTCTCAATATTGCAGGTCTGC TTGAAGGTTTTACCCATGGTGATTACTTTCTTGATGGCGTGAATATCTCTAACTTGAGTGATAACAAGAGTGCAGCGATT CGAAACGAGAAGATAGGTTTTATCTTTCAGGGCTTTAACTTAATTCCTGATCTAAATCTTGCTGAGAATGTTGAGGTACC ACTGCGCTATCGTGGCTTTAATGCCGCCGAGCGTAAACGTCGTGTGCAACATGCACTGGAGCAGGTTGGACTGGCTGCAC GAATGAAGCATCTGCCGTCACAACTTTCCGGTGGTCAGCAGCAGCGTGTGGCTATTGCTCGTGCGCTGGCGGGAGAGCCA AGGTTTCTATTGGCCGATGAGCCAACGGGTAACTTAGACAGCATGATGGCACGTCAGGTGATGGAGTTGCTTGAGGAGAT CAATAAGGCGGGAACCACGATTATTATGGTAACCCATGACCCTGAACTGGCTCGTCGTGCGCAGCGAAACATCCAGATTG TCGATGGCCAAGTATGTGATTTTACCATGTATCAAGGCGGTGCTGAGAAGCCTCATTTGGTGTCTGAAACAGATTCGGCT AGTGATGGACAGCAAGCTCAAACTGAACAAGTTGCAGGATAA Protein sequence : MLSMKSISKVFKTDLVETHALRDFNLEVNEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGVNISNLSDNKSAAI RNEKIGFIFQGFNLIPDLNLAENVEVPLRYRGFNAAERKRRVQHALEQVGLAARMKHLPSQLSGGQQQRVAIARALAGEP RFLLADEPTGNLDSMMARQVMELLEEINKAGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQGGAEKPHLVSETDSA SDGQQAQTEQVAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-34 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 3e-34 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 3e-34 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 3e-34 | 42 |
| Spaf_1862 | YP_006310627.1 | amino acid ABC transporter ATP-binding protein | Not tested | FWisland_2 | Protein | 8e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_4072 | YP_001762423.1 | ABC transporter-like protein | NC_008702.1.4606598. | Protein | 1e-45 | 51 |
| Swoo_4072 | YP_001762423.1 | ABC transporter-like protein | NC_012469.1.7686878. | Protein | 3e-53 | 50 |
| Swoo_4072 | YP_001762423.1 | ABC transporter-like protein | CP001581.1.gene798.p | Protein | 8e-39 | 47 |
| Swoo_4072 | YP_001762423.1 | ABC transporter-like protein | CP001581.1.gene598.p | Protein | 4e-31 | 43 |
