Gene Information

Name : Swoo_3885 (Swoo_3885)
Accession : YP_001762238.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : Na+ dependent nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 4734168 - 4735394 bp
Length : 1227 bp
Strand : -
Note : PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: spl:Spea_0634 Na+ dependent nucleoside transporter domain protein

DNA sequence :
ATGGAAGTTTTCATCAGTTTGTTGGGAATGTTCAGCCTGATCGGTTTGGCTGTGCTGATTTCAGAGAAGCGAACCGCCAT
TAATCTGCGCACGGTACTGGGGGCTTTAGCGTTCCAGATCGCTTTCGGTGCATTTGTGATGTATGTGCCTATGGGGCAAT
CCATGTTGGACAGCGCCTCTGGCGGTGTGATGCATGTAATAGGTTACGCTAACGAAGGTTTATCATTCCTGTTTGGCGAT
CTGGCTAAATTTGGTGTTGGCTTCATCTTTGTGATTAACGTGCTATTTGTGGTGGTGTTTGTCAGCGCCCTGATTGCCGT
GCTGTATTACTTAGGGATCATGCAGTTAATTATAGGCTTGATTGGTGGTGGCCTATCAAAGCTGCTTGGTACCAGCCGCG
CCGAGTCACTGTCTGCGACTGCCAACATCTTTGTTGGTCCTATTGAAGCGCCCTCGATGGTGCGTCCATTCGTTAAGCAC
ATGACCCGCTCTGAACTATTTGCTGTGATGACAGGTGGTTTAGCGTCTGTTGCTGGCGGCACCATGATTGGCTATATCCA
GATGGGCGTCGACGTTAAATATGTACTAACTGCTGCCTTTATGACTGCACCTGCGGGTTTACTGTTTGCCAAGCTTATCT
GGCCTGAGACTGAGGAGCCACAAAACGATATCAAGAAGGTGATGGATGAGCAGGATGACAGACCTGCTAATGTCCTTGAC
GCTGCAGCGGGTGGGGCGGCGATGGGGATGCAACAGGTTATCTCGGTGTCGGCGCTACTGTTAGCTTTCGTTGCCTTGAT
CGCTATGGTTAACGGCATTATTGGTGGGATCGGTGGCTGGTTTGGTTATGGCGAACTAACTATGCAGATGATCTTAGGTT
ACCTGCTTGCACCGTTGGCTTGGATCATGGGGGTGCCTTGGAGTGAAGCGATTCAAGCGGCTTCCTTTATTGGCCAGAAA
ATGGTGATTAATGAGTTTGTTGCCTATATCGACTTCCTTAAGGTTGCCGATCAACTCTCAGAAAAGACGCAGATTATTAT
CAGTTTTACCCTGTGTGGCTTTGCCAATATAGGCTCTTTGGCCATGGTGATTGGTGGCTTAGCGGCGCTTTGCCCTGAGC
GCCGTCATGATTTGAGTGCCATCGGTATGAAGGCGCTTATCGCTGCGGCGTTAGCGAACTTAATGAGCGGTACTATCGCA
GGCTTACTCTTTAGCCTAGCGGGTTAA

Protein sequence :
MEVFISLLGMFSLIGLAVLISEKRTAINLRTVLGALAFQIAFGAFVMYVPMGQSMLDSASGGVMHVIGYANEGLSFLFGD
LAKFGVGFIFVINVLFVVVFVSALIAVLYYLGIMQLIIGLIGGGLSKLLGTSRAESLSATANIFVGPIEAPSMVRPFVKH
MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLIWPETEEPQNDIKKVMDEQDDRPANVLD
AAAGGAAMGMQQVISVSALLLAFVALIAMVNGIIGGIGGWFGYGELTMQMILGYLLAPLAWIMGVPWSEAIQAASFIGQK
MVINEFVAYIDFLKVADQLSEKTQIIISFTLCGFANIGSLAMVIGGLAALCPERRHDLSAIGMKALIAAALANLMSGTIA
GLLFSLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 5e-44 45