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Name : Swoo_3720 (Swoo_3720) Accession : YP_001762075.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4531589 - 4534162 bp Length : 2574 bp Strand : - Note : KEGG: sse:Ssed_3497 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGCGACTCGATCGTATGACCAATAAATTTCAAACGGCAATTTCCGATGCGCAATCTCTCGCGCTAGGTCGTGATCATCA GTTTATTGAACCCATTCATCTTATGATGGCCTTACTGAATCAAGATAATGGGTCTATTCACCCGTTATTAACTCAGGCTG GCATTAATGTTAGTTCGTTGAGGTCTTTGGTTAGCCAAGAGTTGGAGCGTTTACCAAAGGTGGAGGGAACCGGAGGAGAT ATTCAGCTATCACAATCTCTGATCCGTCTGTTGAACCTATGTGACAAACTCTCTCAGAAACGCAAAGATAAATATATCTC CAGTGAGTTATTTATACTCGCAGCACTTGAAGGAAACGATACGCTTGCTCAAAGCTTGAAAAAATCTGGCGCGACGAAAG AGTTGATGGAAGAAACGATAAAACAGGTACGCGCCGGAAAGAATATCGACGATCCTAATGCGGAAGATCAAAGGCAAGCA CTTAAAAAGTTTACCGTCGATCTGACTGAGCGTGCGGAGCAGGGGAAACTTGACCCTGTTATTGGGCGTGATGATGAGAT CCGCCGTACAATTCAAGTGTTACAGCGAAGAAGTAAAAACAACCCTGTATTGATTGGTGAACCAGGTGTGGGTAAAACCG CCATTGTTGAGGGGTTAGCTCAGCGGATCATTAATGGTGAAGTACCCGAAGGGATAAAAAACAAGCGTGTGTTGTCATTA GACATGGGCTCGTTAGTTGCTGGGGCTAAATATCGTGGTGAATTTGAGGAAAGATTAAAGGCGGTTCTCAATGAGTTGTC TCAAGAGGAGGGGCAAGTGATCCTCTTTATCGATGAGCTGCATACTATGGTTGGCGCAGGTAAAGGGGATGGTGCTATGG ATGCGGGCAATATGCTTAAACCTGCATTAGCACGTGGTGACCTTCACTGTGTGGGTGCAACGACCTTAGATGAGTATCGT CAATATATTGAAAAAGATGCGGCACTTGAAAGACGCTTTCAAAAAGTCTTGGTTGAAGAGCCGAGTGTTGAGGATACTGT TGCTATTCTACGTGGTCTAAAAGAGCGTTATGAGCTTCATCATCATGTTGAGATCACTGATCCTGCGATTGTTGCTGCCG CTAGCATGTCAAATCGTTATGTTTCTGATAGGAAACTACCGGATAAAGCAATAGATCTTATCGATGAAGCTGCATCGAGT ATCCGAATCCAGATTGACTCTAAACCTGAGCCGCTGGACAAATTGGAGCGCCGTGCCATTCAGCTTAAGCTAGAGGAGCA AGCACTGACAAAAGAAGCTGATGAAGCTAGCCTTCGCCGCCTGCTGACTATACGAAAAGAGCTAAGAGAAGTTGAAGTGA AGGCCTCTGAGCTAAATGAGGTGTGGCGAACAGAGAAGGCTGCACTAGCTGGAACCCAACATATAAAGTCGGATCTGGAG CAGGCAAGATTGGATCTCGATGTTGCTCGCAGAGCTAGTGATCTGACTCGTATGTCTGAACTGCAGTACGGTCGTATTCC TGAACTAGAGAAACAGCTGGACTTAGCATCTCAAGCTGAGATGCAAGAGATGACCTTACTTAGAAATAAAGTCACGGATG TGGAGATCGCTGAAGTACTATCTCGTGCTACTGGTATTCCTGTTTCTAAGATGCTTGAAGGTGAGCGAGAAAAGCTTCTG CATATGGAGGATGCTCTGCATACCCAAGTGATAGGCCAGAATGAAGCTGTGGATGCGGTTTCGAATGCGATTAGACGTAG TCGAGCTGGTCTATCAGATCCCGATCGTCCAATTGGTTCGTTTCTGTTTTTAGGTCCAACAGGGGTGGGGAAAACTGAGC TATGTAAGTCACTGGCTAAGTTTCTCTTCGATACTGAGTCAGCATTAGTGCGTATCGACATGTCAGAGTTTATGGAAAAA CACTCTGTTGCGCGTCTGCTTGGGGCGCCTCCAGGATATGTGGGCTATGAAGAGGGGGGCTACCTAACCGAGGCTGTAAG ACGCAAACCTTACTCAGTGATCTTACTTGATGAAGTTGAGAAGGCGCACCCAGATGTATTTAATATCTTGTTGCAGGTAC TTGATGATGGTCGCTTAACCGATGGTCAAGGAAGAACCGTAGATTTTAGAAATACTGTTGTGATCATGACCTCGAATCTA GGTTCAGATATCATTCAGGAGCGCTTTTCGACCCTATCTTATGATGAGATGAAGTCAGAGGTGATGAATGTTGTTGTTCA TAGTTTCAGACCTGAGTTTCTGAACCGAGTTGATGAGACTGTAGTGTTCCATCCTTTGGGCGAAAAGCATATTGAACATA TTGCTTCAATCCAAATTGAATCTTTGATGCGACGTCTAGCGGAAAAAGATTACGAGCTAGATATCAGTGATGACGCGCTT TCCTTTATTGCTAGAGCTGGGTTTGACCCCGTCTATGGTGCGCGGCCGTTAAAGCGTGCTTTACAGCAAGAGGTGGAGAA CCCGTTAGCTCAGAAGATACTAAGCGGTAGTTTAGTGCCGGGTAAACCGATTATCGTTGAGAATGAAGAGGGTGAACTCT CCTTTAAGCAGTAA Protein sequence : MRLDRMTNKFQTAISDAQSLALGRDHQFIEPIHLMMALLNQDNGSIHPLLTQAGINVSSLRSLVSQELERLPKVEGTGGD IQLSQSLIRLLNLCDKLSQKRKDKYISSELFILAALEGNDTLAQSLKKSGATKELMEETIKQVRAGKNIDDPNAEDQRQA LKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSL DMGSLVAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYR QYIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLIDEAASS IRIQIDSKPEPLDKLERRAIQLKLEEQALTKEADEASLRRLLTIRKELREVEVKASELNEVWRTEKAALAGTQHIKSDLE QARLDLDVARRASDLTRMSELQYGRIPELEKQLDLASQAEMQEMTLLRNKVTDVEIAEVLSRATGIPVSKMLEGEREKLL HMEDALHTQVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKSLAKFLFDTESALVRIDMSEFMEK HSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDIIQERFSTLSYDEMKSEVMNVVVHSFRPEFLNRVDETVVFHPLGEKHIEHIASIQIESLMRRLAEKDYELDISDDAL SFIARAGFDPVYGARPLKRALQQEVENPLAQKILSGSLVPGKPIIVENEEGELSFKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-160 | 45 |
