Gene Information

Name : Swoo_3551 (Swoo_3551)
Accession : YP_001761910.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 4334703 - 4335962 bp
Length : 1260 bp
Strand : -
Note : TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: sse:Ssed_3380 nucleoside transporter

DNA sequence :
ATGGATATTTTAATGAGTTTAGTAGGGGTGGTCACCTTACTAGCGATAGCGTTCGCGCTATCTAATAATAAAAAAGCAAT
TAATAAGCGTACTGTATTTGGTGCTCTAGCAATTCAAGCTGCATTTGGTGGTTTTGTTTTGTATGTACCAGTTGGTAAAG
ATATCCTTAAGACAGTATCTGATGGCGTATCAAGCGTTATTGGTTACGCTCAAAACGGTATCGGCTTCCTGTTTGGCGAC
TTGGCTAACTTTAAAGTTGGTTTCATCTTCGCCGTCAATGTACTTCCAGTCATTGTTTTCTTCTCTTCTCTTATTGCAGT
CCTTTACTACCTTGGCGTTATGCAGTGGATCATCCGTATTATCGGTGGCGCACTTCAAAAAGCACTAGGTACGAGCCGTA
CTGAGTCTATGTCTGCTACTGCGAACATCTTCGTTGGTCAAACTGAAGCACCACTTGTGGTTCGTCCGTTTATCGCGACT
ATGACTAACTCTGAGCTATTTGCCATCATGGTAGGTGGTTTAGCGTCTATTGCTGGTTCAGTAATGGCTGGTTACGCGCA
GATGGGTGTACCTATCGAGTATCTCGTTGCCGCTTCATTCATGGCAGCACCAGGTGGTCTATTAATGGCTAAACTGATGC
ACCCAGAGACTGAAGAAGCTAAAAACGACATGAGCGATCTTCCTGAAGATCCTGACAAGCCAGCTAACGTACTTGACGCT
GCCGCTGCTGGTGCTTCATCTGGTATGCACTTAGCACTTAACGTTGGTGCAATGTTACTAGCTTTCGTTGGTCTTATCGC
AATGCTTAACGGCATTATCGGTGGTATCGGTGGCTTTATTGGTATGGAAGGGCTAACGCTTGAGTTGATCCTTGGTTATA
TTTTCATGCCTCTAGCATTCCTTATCGGTGTACCTTGGAACGAAGCACTTGTTGCAGGTTCTTTCATCGGTCAGAAGATT
GTTGTTAACGAATTCGTTGCTTACCTGAACTTCGCTCCATACCTAAAAGATGTGGCTGACGGTGGTGTTTTAGTTGAAGC
AACTCAAGCTGTTATGACTGATAGAACCAAAGCTATCATCTCATTCGCTCTGTGTGGTTTCGCTAACCTATCTTCAATCG
CGATTCTACTTGGTGGTCTAGGTGCTATGGCTCCTACACGTCGCCATGACCTAGCTAAGCTTGGTATTCGCGCTGTGATT
GCAGGTTCTCTTGCAAACTTGATGAGTGCGACGCTAGCAGGTCTATTCCTAGCGATTTAA

Protein sequence :
MDILMSLVGVVTLLAIAFALSNNKKAINKRTVFGALAIQAAFGGFVLYVPVGKDILKTVSDGVSSVIGYAQNGIGFLFGD
LANFKVGFIFAVNVLPVIVFFSSLIAVLYYLGVMQWIIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIAT
MTNSELFAIMVGGLASIAGSVMAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEEAKNDMSDLPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLLAFVGLIAMLNGIIGGIGGFIGMEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKI
VVNEFVAYLNFAPYLKDVADGGVLVEATQAVMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLAKLGIRAVI
AGSLANLMSATLAGLFLAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 1e-68 47