Gene Information

Name : Swoo_3463 (Swoo_3463)
Accession : YP_001761824.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4236906 - 4237652 bp
Length : 747 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_0770 3-oxoacyl-[acyl-carrier-protein] reductase

DNA sequence :
ATGGAAAAAGTGGCATTGATAACAGGCGGCGGCCGTGGCATTGGCGCTGCGACAGCAAGGTACCTTGCTGATCACGGGTA
TTCGGTTGGCGTTAACTACAAACAGAACAGTGAAACTGCTGATGCTTTGGTGGCTCAACTGCAAGCTCAAGGTTGTCGAG
CCCAAGCATTTCAGGCTGATGTGTCCGTCGAGTCAGAGGTAGTTGCTATGTTCCATGAGCTGGATCTGCACTTAGGCAAG
ATCACGGCTCTGGTTAACAATGCGGGCATTTTGCAGCCTCAGATGAAAGTTGTTGATATGTCAGCCGAGCGTATTAATAG
GATGTTGACCAATAATGTCACTAGCTATTTTCTCTGCTGCCGTGAGGCTGTAAAACGTATGGCTCTGTCTAAAGGGGGCT
ATGGAGGCGCAATAGTCAATGTCTCCTCAGTTGCATCAAGAGTTGGTGGTGCAGGGGAGTATGTCGATTATGCCGCTTCT
AAAGGTGCCGTCGATACTTTAACCATAGGTTTATCGTTAGAGGTTGCAGCCGATAGCATACGTGTTAATAGCGTTCGTCC
TGGATTTATTCACACACAGATGCATGCCGATGGTGGTGAGCCTGATAGGGTGAAGCGTCTTGCGCCTAATATCCCTATGA
AACGAGGAGGGGAGCCCGATGAGGTCGCAGCGGCTATCGCTTGGTTGCTCTCTGATGAAGCCTCCTATGTGACAGGCACC
TTTGTCGATATTGCGGGTGGACGTTAG

Protein sequence :
MEKVALITGGGRGIGAATARYLADHGYSVGVNYKQNSETADALVAQLQAQGCRAQAFQADVSVESEVVAMFHELDLHLGK
ITALVNNAGILQPQMKVVDMSAERINRMLTNNVTSYFLCCREAVKRMALSKGGYGGAIVNVSSVASRVGGAGEYVDYAAS
KGAVDTLTIGLSLEVAADSIRVNSVRPGFIHTQMHADGGEPDRVKRLAPNIPMKRGGEPDEVAAAIAWLLSDEASYVTGT
FVDIAGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 6e-63 61
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 3e-64 60