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Name : Swoo_3341 (Swoo_3341) Accession : YP_001761705.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 4094879 - 4097455 bp Length : 2577 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAAAGCGATCGACAGCCAAGATTTAGAAAAACATACCCCTATGATGCGTCAGTATTTGACTTTAAAAGCCGAAAATCC AGATGTACTTCTTTTCTACCGTATGGGCGATTTCTATGAGCTTTTTTACGATGATGCCAAGAAGGCATCTGAGCTATTAG GGATCTCACTTACAGCAAGAGGCAAAAGTGGTGGTGATCCTATCCCTATGGCTGGCCTTCCCTACCACGCTGTAGAGGGC TATTTGGCAAAGCTGGTTCAACTGCGAGTTTCGGTTGCTATCTGTGAACAAGTTGGCGATCCAGCGACATCTAAAGGCCC GGTTGAGCGTAAGGTGGTTCGACTCGTCACACCAGGCACACTCACCGATGAAGCGTTACTGCAGGAGAGACAAGATAATC TACTTGCAGCGGTTTATCACGGTAAAAAAGGCTTTGGCTATGCCACATTAGATATTAGTTCGGGGCGATTTGTCATTGCG GAACTTGAGTCCTGTGAAGCACTAGAAGCAGAGCTTCAACGTACCAGTCCAGCTGAGCTTCTCTACAGTGAAGACTTCTC TGAGATGAGCCTGATTTCAGCATTTGAAGGCACCCGCCGTCGCCCTGAGTGGGAGTTTGATTTCGACACAAGTCAAAAGC TTCTGCTTGATCAATTTGGTACCAAAGATCTGCAAGGTTTTGGGTTAGATGGTGCTCGGCTATCTCTTCAGGCAGCCGGT TGTCTTATGCAGTACGTAAAAGACACTCAACGCACAGCACTCCCTCATATCAACTCAATAGTCAGGTTTAATCAAGGCGA TAGCATCATTCTCGATGCTGCAACCAGACGTAACCTAGAGCTAACGATGAACCTCCAAGGGGGCCACTCAAATACGCTTG CCACTGTGCTCGATAATACAACGACTCCGATGGGAAGTCGTATGTTACAAAGATGGATCCACGAGCCACTGCGTGATCGT CAGCGTATCGAAGCGCGTCAAAGCGCCCTCGAAGAGATATTGGAGAATGGTCTCTATGATGAGTTGCACCCTCTATTAAA GTCACTGGGTGATGTTGAGCGGATAACCGCGAGGCTTGCATTGAGAAATGCACGTCCCAGAGACTTCTCTCGCCTTAAGC ATGCCTTAGCGATACTGCCAGAGATCCAACAAATACTGGCCAGATGCCAATCGGCTCACCTTCAATCTTTAGCTAGAATT ATCAGTGAGTTTCCAGAGGAACTAGCATTACTTGATAGTGCGATCGTCGATAATCCTCCTATGCTTATCCGTGATGGTGG GGTGTTAAAGCCTGGCTACAATGCTGAATTAGATCAATGGCGTGACCTAAGCCAAGGCGCAACAGACTACTTAGCTGAGC TTGAGGCAAGAGAAAAAGAGGCCACTGGCATCTCGACGCTAAAAGTCGGCTACAATCGTGTACACGGTTACTATATTGAG GTCAGTCGGAGAGAATCTGATCTTGTGCCTCTGAGTTACCAGCGCAGACAGACACTGAAAAATACTGAGCGTTATATTGT CGCAGAGCTAAAGGAGCACGAAGAGAAAGTGCTCTCCAGCCAAGGCAAAGCCCTAGCCCTTGAGAAGCAACTATGGGATC AACTGTTCGATCTTATCTTGCCTCAGCTCCATGAATTGCAACTTTTCGCCCAAGGTGCAGCAGAGCTAGATGTACTCGCA AACTTTGCAGAGCGAGCCGACACGCTCAACTATCAAAGACCAGTGTTAACCGATATCCCTGGTATTCAAATAGAGTCTGG TCGACACCCTGTAATTGAACAGGTGAGTCAAACTCCATTCATTGCCAATCCAGTGACCTTAAGTCCTGCGAGAAAGATGT TGATAGTGACAGGTCCAAATATGGGCGGTAAATCGACCTATATGAGGCAAGTGGCCTTAATCACCTTGATGGCACATATA GGCTGTTATGTTCCAGCTCAAAGCGCGACTATCGGCCCAGTTGATCGCATATTCACTCGCATAGGCGCCGCCGATGATCT CGCCTCTGGTCGCTCAACCTTTATGGTCGAGATGACTGAAACCGCCAATATACTTCACAATGCGACACCAAAGAGTTTAG TACTGATGGATGAGATAGGTCGAGGCACATCGACTTACGATGGTCTATCTCTAGCTTGGTCTGCGGCGGAATATTTAGCG CAGAAAATTGAGGCCATGACACTATTCGCAACTCACTATTTTGAGCTAACTCAACTACCAGAGCTAATATCAAATGTGGC GAATGTACACTTAGATGCAATTGAACACGGTGACACGATCGTCTTTATGCACGCAGTGCAAGATGGCGCGGCCAGCAAGA GTTACGGACTTCAAGTTGCCGCACTTGCAGGAGTACCTAACCCTGTCATTTTGGCTGCAAAACACAAGCTACACCATCTG GAAAGCCGTGATAATCACAATACACAGCAGACAGACTCAAGTGGTGTACAGCAAAGTATGGTATTTCCAGACCCTATAAA ATCACCTCTTGAGGAGGCGATGGAATCAATCAGGCCAGATGAGCTTAGCCCTAAACAGGCTTTGGATATCCTGTATAGAT TAAAGGATTTAAGTTAA Protein sequence : MKAIDSQDLEKHTPMMRQYLTLKAENPDVLLFYRMGDFYELFYDDAKKASELLGISLTARGKSGGDPIPMAGLPYHAVEG YLAKLVQLRVSVAICEQVGDPATSKGPVERKVVRLVTPGTLTDEALLQERQDNLLAAVYHGKKGFGYATLDISSGRFVIA ELESCEALEAELQRTSPAELLYSEDFSEMSLISAFEGTRRRPEWEFDFDTSQKLLLDQFGTKDLQGFGLDGARLSLQAAG CLMQYVKDTQRTALPHINSIVRFNQGDSIILDAATRRNLELTMNLQGGHSNTLATVLDNTTTPMGSRMLQRWIHEPLRDR QRIEARQSALEEILENGLYDELHPLLKSLGDVERITARLALRNARPRDFSRLKHALAILPEIQQILARCQSAHLQSLARI ISEFPEELALLDSAIVDNPPMLIRDGGVLKPGYNAELDQWRDLSQGATDYLAELEAREKEATGISTLKVGYNRVHGYYIE VSRRESDLVPLSYQRRQTLKNTERYIVAELKEHEEKVLSSQGKALALEKQLWDQLFDLILPQLHELQLFAQGAAELDVLA NFAERADTLNYQRPVLTDIPGIQIESGRHPVIEQVSQTPFIANPVTLSPARKMLIVTGPNMGGKSTYMRQVALITLMAHI GCYVPAQSATIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATPKSLVLMDEIGRGTSTYDGLSLAWSAAEYLA QKIEAMTLFATHYFELTQLPELISNVANVHLDAIEHGDTIVFMHAVQDGAASKSYGLQVAALAGVPNPVILAAKHKLHHL ESRDNHNTQQTDSSGVQQSMVFPDPIKSPLEEAMESIRPDELSPKQALDILYRLKDLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_3341 | YP_001761705.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 67 |
