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Name : Swoo_3095 (Swoo_3095) Accession : YP_001761461.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Resistance Product : methionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 4.4.1.11 Position : 3793254 - 3794432 bp Length : 1179 bp Strand : - Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sse:Ssed_1559 methionine gamma-lyase DNA sequence : ATGCAAGACAAATGGAAATTAGCCACAAAAGTGATCCATGCAGGACATATTAGAAGTAGTTCTGGCGCACTGGTAACCCC TTTATGCCAAAGTGCGACTTTTGTTTTTGATAGTGCTGAACAGGGAGGTGAGAGATTTGCCGGCGATCAACCCGGTTATA TCTACACCCGCTTAGGTAATCCAACCACAGCGGAACTAGAACGTAAGATGGCTGCACTTGAAGGTGCTGAGGCCGCTGTT GCGACAGCGTCGGGCATGGCTGCTGTGTCATCTGCGCTGTTGGCCAATCTGCAGCATGGCGATCATCTTGTGGCATCTAA GGCTGTATATGGTTGCACTTTCTCCCTGATGACAGCACAATTTTTACGATTTGGCATCGAGGTTACCTTAGTCGATTTTA ATGACCTATCAGCCATTAAAGAAGCGATTAAACCCACAACCAAAGTGCTGTTTTGTGAAACCCCGGTAAATCCTCATTTA GACGTATTCGACTTAGATGCTATCGCAAAGATTGCTCAAGCAAACAAGTTAGTGAGTATTGTCGATAACACCTTTATGAC CCCCCTGTTACAGCAACCCTTGACCCATGGGATCGATATCGTTGTTCATAGTGCGACCAAGTACCTTAATGGTCATGGTG ATGTGATTGCTGGGGTGATATGCGGTAGCAATGAGCAGATAGAGCAGATTAAATATGAAACCGTGAAGGACTTGGGCGGT GTGTTATCTCCCCATGATGCTTGGCTGATACTGCGTGGTCTTAAGACGCTAGATGTAAGACTAGCCAGACATTGTGATAA TGCTGAATGCTTGGCGTATTACCTGCTAAACCATGAAAAAGTGACTAAAGTGTATTACCCAGGTCTTGAGGGGCATAGTG GTTACCCACTGCTTGGTACTCAGATGAAAAGAGCCGGTGGGGTGATTGCCTTCGAGCTAAATGGCGCAATGGAGCAGTCC CTGCAGTTTATTAACAGCTTAACGCTATTTTCTATTGCCGTTAGTTTAGGCGATGCCGAGTCTCTTATTCAACATCCAGC TTCGATGACTCACTCCCCTTACTCCGAACAGGAGAGGGAGCTTGCTGGTATTGGCGAGAGCTTATTGCGAATATCTGTGG GACTGGAGTCTGTAGAAGATTTGATAAGTGACTTAGAGCAGGCTTTGGCCTTGGTTTAG Protein sequence : MQDKWKLATKVIHAGHIRSSSGALVTPLCQSATFVFDSAEQGGERFAGDQPGYIYTRLGNPTTAELERKMAALEGAEAAV ATASGMAAVSSALLANLQHGDHLVASKAVYGCTFSLMTAQFLRFGIEVTLVDFNDLSAIKEAIKPTTKVLFCETPVNPHL DVFDLDAIAKIAQANKLVSIVDNTFMTPLLQQPLTHGIDIVVHSATKYLNGHGDVIAGVICGSNEQIEQIKYETVKDLGG VLSPHDAWLILRGLKTLDVRLARHCDNAECLAYYLLNHEKVTKVYYPGLEGHSGYPLLGTQMKRAGGVIAFELNGAMEQS LQFINSLTLFSIAVSLGDAESLIQHPASMTHSPYSEQERELAGIGESLLRISVGLESVEDLISDLEQALALV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 1e-55 | 44 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-56 | 42 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 6e-58 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_3095 | YP_001761461.1 | methionine gamma-lyase | BAC0207 | Protein | 2e-79 | 49 |
