Gene Information

Name : Swoo_2778 (Swoo_2778)
Accession : YP_001761149.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3394213 - 3395157 bp
Length : 945 bp
Strand : -
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: slo:Shew_1478 protein of unknown function DUF1722

DNA sequence : 
ATGGATAAAAAACTCAATATTGGGATCAGCGCATGCGTCATGGGGGAAAATGTACGTTATGACTCAGGCCATAAACGCTC
ACAATTTTGTACCGAAGCATTGTCAGAATTTGCTAACTTTAAAGCATTCTGTCCAGAGGTTGCTATTGGACTGCCCATTC
CGCGGCCCACAATCCGCCAGATAATAAAAGATAACATTATCACTGTATCTCGCCCTGATGGCAGTGGAGATGTAACCGAA
AAATTAACGGCATATGGTAAGCAAGTTGGAGAGCAGATAAGCCATCTGAGTGGTTTTATATTTTGTGCTAAAAGTCCAAG
TTGCGGTATGGAGCGAGTTAAGGTCCATCACCATCATGGTAAAGGTTCTGAGTCCAATGGCGTCGGTTTGTTTGCTCGTG
AGGTAATGAAGGCTAATCCTCTGTTACCTGCAGAGGAAAATGGCAGACTCAATGATGCAGTGATCCGTGAAAACTTCATG
ACACGCGTGTTTACTTATCAAAAGTGGCTAGATTTAGCCGCCAGTGGCATAACAAAGCACAAGCTTATTCAGTTTCATAG
TGAGCAAAAGTACCTAGTGATGAGCCACCATATTGAGAGTTATCGTCAGCTAGGGACGCTACTTGGAAGTAGTGATTTAG
CCCTTGATGAGTTAGCTAACCAGTATATCGCAGGTTTGATGGAGGCACTTAAAAACAAGGCATCACGTAAGAGCCACACT
AACACATTACATCATCTGCAAGGTTACTTTAAAAAGCAGCTTGATCACGCAAAACGTCAGGAGTTAACTGAGCAGATTGA
TGCTTACAGGCTGGGGCTGACACCACTCTTAGTGCCATTGACCTTAATTAAGCATTATTTACTGGAATTTCCCAACGAAT
ATCTAAAGCAGCAGGCGTACCTTAATCCTCATCCTAAGGAGCTAAGGCTAAGGTATGGCTATTAA

Protein sequence : 
MDKKLNIGISACVMGENVRYDSGHKRSQFCTEALSEFANFKAFCPEVAIGLPIPRPTIRQIIKDNIITVSRPDGSGDVTE
KLTAYGKQVGEQISHLSGFIFCAKSPSCGMERVKVHHHHGKGSESNGVGLFAREVMKANPLLPAEENGRLNDAVIRENFM
TRVFTYQKWLDLAASGITKHKLIQFHSEQKYLVMSHHIESYRQLGTLLGSSDLALDELANQYIAGLMEALKNKASRKSHT
NTLHHLQGYFKKQLDHAKRQELTEQIDAYRLGLTPLLVPLTLIKHYLLEFPNEYLKQQAYLNPHPKELRLRYGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-63 45
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-63 45
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-63 45
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-64 45
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 9e-64 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swoo_2778 YP_001761149.1 hypothetical protein VFG0490 Protein 4e-64 45