|
Name : Swoo_2658 (Swoo_2658) Accession : YP_001761029.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Virulence Product : IucA/IucC family protein Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG4264 EC number : - Position : 3252671 - 3254389 bp Length : 1719 bp Strand : + Note : PFAM: IucA/IucC family protein; KEGG: spe:Spro_0920 IucA/IucC family protein DNA sequence : ATGATAAACAGTGAAGATTGGCAAAAGATAAACACTTCTCTATGCGCAAAAATTATTTCAGAGCTTCACTACGAGGAGCG ACTTTATCCCACTGATAAAGGGGATTACTGGCAATTAAATACCCCACACAGAAACTGGGAGTTTAAAGCCAAAGTGACGG TTTGGGGAATGCTTGAGATTGAGCCCTACTCCATGACGTGCTCCGACAATCTGGCACCGCAAGCGTGCCAATTATTATTG GATACACAAGAGATGCTAAAAATCTCTGACATTAACCTTGCAAACCTTTTAGAAGAGATTCAGCAAACGCTATATAGCGA TACAGTTCGGCTATCTAAGCTCCAAGGAGTGACAGCTTCAGATCTAGTCACTATGGATGAAACAGAGCGCCAACGTTATA TTGATGCACACCCTAAAGCTATTGCAAACAAAGGCCGACTAGGTTGGGGAGAAGCATCGCTAAAAAACTACTCTCCTGAG TCAGGAAGCTCCTTTCAGCTTCATTGGTTAGCCATTGATAAGTCATACTGCAAGTCAGGGATCAGTGAAGAGATTAATTA CCTTCAAATACTCAATAATGTTTTAGGGGAGTCTGAAGTGCGCTCTCTAACCAGTAAATTAGGAGAAGACTCCGATAAGT ATTGGTTGGTCGCGGTTCATCCATGGCAGTATCAACGTTTTTTAACCGGACAATATGCAAGTCTGTTTGCAAATAAAACC ATTGTAGACCTTGGTGAGCTAGGATCTGCTTGGTATGCACAGCAGTCAATTCGAACATTAAGCTCAGCATCGCAAGAGGT AAGGTTTGATGCAAAAACTGCACTCAGTATTTTAAATACATCTTGCTATCGTGGGATCCCTGGAAAGTTTATCGTTCAAG GACCAAAGTTATCAGCTTGGCTAAAACAACTAGCCAATGAGGACTCGACATTAAGAGCTTGCGGCTTGCATGTTCAGCAA GAAATTGCTGGTTTCTACTGCCCGCACCCTTACCAATCTCAGATAGAGCAAGGTCCTTATCGATATCAAGAGATGCTAGG GTGTATTTGGCGAGAACGTGCCGAGCACGTATTAAGCGTAAACCAACGACCGATAACAATGGCGGCGCTAATGCAAACCG ATTTACATGGAGATCCGCTCATTGGCGCTTTGATAAAAAAATCGACTATTGATATCGAACCTTGGCTAGAAAAGTTGTTT TTCCATGTTGTCATACCTGTTTATCATCTAATGTGCCAATACGGAGTTGGACTTGTGGCGCATGGTCAAAACATTACTCT TGTGTTAGAGAATCACCAACCTGTCGGTTGCATTATCAAAGACTTTCACGGCGATCTAAGAATTGTTGATCAAGACTTTG CAGAACTAGACTCTCTCCCTGCTGAGATAAGAGACGCACTAACTCGGCTCCCTGCAAACTACTTGATTCATGATCTATTG ACTGGTCATTTTGTCACGGTACTGCGATTTATTTCGCCTAAAATTGCCGCTTTGGGACTAAGCGAAATACAATTTTATCG ATTACTTAAACAGGTCATTAACACTTATCAAGCACAGCACCCTCAACTGTCAGATAGATTCACGCAATTTAACCTGCTTA CGCCCGATATCGATAAAGTTTGCATCAATCGCGTTCGTTTTAAAATTGGTTACGGTGACAGTGACGAGCGACCTCTACCA GAAATAGGAAAGCCAATCAAAAATCCATTAATGCAGTAA Protein sequence : MINSEDWQKINTSLCAKIISELHYEERLYPTDKGDYWQLNTPHRNWEFKAKVTVWGMLEIEPYSMTCSDNLAPQACQLLL DTQEMLKISDINLANLLEEIQQTLYSDTVRLSKLQGVTASDLVTMDETERQRYIDAHPKAIANKGRLGWGEASLKNYSPE SGSSFQLHWLAIDKSYCKSGISEEINYLQILNNVLGESEVRSLTSKLGEDSDKYWLVAVHPWQYQRFLTGQYASLFANKT IVDLGELGSAWYAQQSIRTLSSASQEVRFDAKTALSILNTSCYRGIPGKFIVQGPKLSAWLKQLANEDSTLRACGLHVQQ EIAGFYCPHPYQSQIEQGPYRYQEMLGCIWRERAEHVLSVNQRPITMAALMQTDLHGDPLIGALIKKSTIDIEPWLEKLF FHVVIPVYHLMCQYGVGLVAHGQNITLVLENHQPVGCIIKDFHGDLRIVDQDFAELDSLPAEIRDALTRLPANYLIHDLL TGHFVTVLRFISPKIAALGLSEIQFYRLLKQVINTYQAQHPQLSDRFTQFNLLTPDIDKVCINRVRFKIGYGDSDERPLP EIGKPIKNPLMQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iucC | YP_002414044.1 | Aerobactin siderophore biosynthesis protein | Virulence | Not named | Protein | 2e-109 | 43 |
| iucC | AAK71633.1 | IucC | Virulence | SHI-3 | Protein | 2e-108 | 42 |
| iucC | NP_839221.1 | siderophore biosynthesis protein | Virulence | SHI-2 | Protein | 6e-109 | 42 |
| iucC | NP_709456.1 | siderophore biosynthesis protein | Virulence | SHI-2 | Protein | 6e-109 | 42 |
| iucC | AAD44748.1 | IucC | Virulence | SHI-2 | Protein | 2e-108 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_2658 | YP_001761029.1 | IucA/IucC family protein | VFG0938 | Protein | 8e-110 | 43 |
| Swoo_2658 | YP_001761029.1 | IucA/IucC family protein | VFG0617 | Protein | 3e-109 | 42 |
| Swoo_2658 | YP_001761029.1 | IucA/IucC family protein | VFG1083 | Protein | 9e-109 | 42 |
