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Name : Swoo_2592 (Swoo_2592) Accession : YP_001760964.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3168640 - 3170598 bp Length : 1959 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCAAATCGTCGTCAAACCCGAGCTCAAGCTCAACAATTTATTGATACTTTAACACCACTTCAACACCCTAATTCAGA GAAGGTTTATCTGACTGGGAGTCGCGAAGACCTGCGTGTTGGTATGCGTCAAATTTTGCAATCCGATACTTTAGTCGGCG GCACCGAAGCCGATCCCATTCTTGAGTCTAACCCACCTTTAAAAGTTTATGATTGTGCAGGGCCATATTCGGATCCTGAT GCAGAGATAAATGTACGCGCAGGCTTGAATAAATTTAGACAAAGCTGGATTGAGGAGCGAGCTGACACAGAGCAACTTGC TGGTGTTAGCTCAGGCTTTACCCAGCAACGTTTAGCTGATGATGGCTTGGATCATCTCAGGTTTGATTCACTGCTTCCTC CACGCAGAGCTCAATCAGGCAAGCGTGTGACTCAACTCCACTATGCAAGGAATGGAATTATCACTCCTGAGATGGAGTAC ATCGCCATCCGTGAAAATATGGAGCAGGCTGGGATCACCGATCCAGTTTTAAGGCAAAAAGCCAAAGGAGAAAGCTTTGG TGCCTCTATCGAGCAAGTGATCACCCCTGAGTTTGTGCGTCAAGAAGTGGCCCGCGGTCGTGCAATTATTCCTTTGAACA TCAATCATCCTGAAGCTGAGCCTATGATCATTGGCCGTAACTTCTTGGTAAAGGTGAATGCCAATATCGGAAACTCTGCC GTGACTTCATCCATTGAGGAGGAGGTTGAGAAACTGGTTTGGTCAACCCGCTGGGGCGCAGATACCGTGATGGATCTCTC CACTGGCCGCTACATTCATGAAACCCGTGAGTGGATAATACGTAACTCTCCAGTGCCGATAGGAACCGTACCCATCTATC AAGCATTAGAGAAGGTCAATGGTGTTGCTGAAGATCTTAGCTGGGAGGTGTTTAGAGATACCTTGGTTGAGCAGGCAGAG CAAGGCGTTGATTACTTTACGATTCACGCAGGGGTTCTACTTCGCTATGTACCCATGACGGCAAAACGGGTGACAGGTAT TGTGTCTCGTGGTGGCTCGATCATGGCTAAGTGGTGTTTGTCTCATCATAGTGAAAACTTCCTTTATGAACACTTCACAG AGATCTGTGAACTGTGCGCCGCCTACGATGTCTCGCTTTCATTGGGTGATGGCATGCGTCCAGGCTCTATCGCAGATGCC AACGATGAGGCTCAGTTTAGTGAGTTAGAGACCTTAGGAGAGCTGGTTAAAATAGCGTGGGAGTATGATGTTCAAACCAT TATCGAAGGCCCTGGCCATATCCCGATGAACTTAATCAAGGAGAACATGGATAAGCAGCTAGCACTCTGTGATGAGGCGC CGTTTTACACTTTAGGGCCACAAACCACCGATATCGCGCCTGGCTATGATCATTTTACATCGGGGATCGGTGCGGCAATG ATCGCATGGTACGGCTGCGCCATGCTCTGTTATGTTACCCCCAAAGAACACCTTGGTCTGCCCAATAAAGAAGATGTTAA GCAAGGGCTTATCGCATACAAAATTGCCGCTCATGCTGGTGATGTGGCTAAAGGGCATCCAACGGCACAGATCCGTGACA ACGCGCTCTCTAAGGCAAGGTTTGAGTTCCGCTGGGAAGATCAATATAACTTAGGACTCGACCCTGAGACAGCTCGCGCT TATCACGATGAGTCTCTGCCTCAAGAGTCGGCAAAAGTGGCTCACTTCTGCTCCATGTGTGGGCCTAAATTCTGCTCTAT GAAGATTAGCCAAGAGGTACGTGATTACGCCGCATCTCAAGAGGTTGAGCTGCAATCTCATGCCAGTTATCAGGCTAAAA GTGCCTCAGAAATAGAAACTGGAATGGCGCAAATGTCTGCAGAGTTCAAGGCTAAAGGCGCAGAGCTTTACCATGAAACG GCTGTCGTTGATGAAGAACTCGCGGACGCAGAGGCTTAA Protein sequence : MSNRRQTRAQAQQFIDTLTPLQHPNSEKVYLTGSREDLRVGMRQILQSDTLVGGTEADPILESNPPLKVYDCAGPYSDPD AEINVRAGLNKFRQSWIEERADTEQLAGVSSGFTQQRLADDGLDHLRFDSLLPPRRAQSGKRVTQLHYARNGIITPEMEY IAIRENMEQAGITDPVLRQKAKGESFGASIEQVITPEFVRQEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSA VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLSWEVFRDTLVEQAE QGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHSENFLYEHFTEICELCAAYDVSLSLGDGMRPGSIADA NDEAQFSELETLGELVKIAWEYDVQTIIEGPGHIPMNLIKENMDKQLALCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAGDVAKGHPTAQIRDNALSKARFEFRWEDQYNLGLDPETARA YHDESLPQESAKVAHFCSMCGPKFCSMKISQEVRDYAASQEVELQSHASYQAKSASEIETGMAQMSAEFKAKGAELYHET AVVDEELADAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 69 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 69 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
