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Name : Swoo_2522 (Swoo_2522) Accession : YP_001760894.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3522 EC number : - Position : 3083105 - 3084439 bp Length : 1335 bp Strand : - Note : TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: vch:VCA0114 hypothetical protein DNA sequence : ATGTCGTCAAGAAATAGAGTAATTTGGGCTGAAGGTTTATTCATCAAGCCACAACATTTTCAGCAGCAGCAACGTTATTT TGAGTATGTCACCGATGAGCGTATGACCTCGGTCAACAGCTACCTCTACGGTATATCACAGCTCGAGCTAAACCCTGAGT ACCTCGGGTTTGGTCGTATTGCGATTCAACGAGCTAAAGGCGTGATGCCAGATGGAACAGTATTTAATATTCCCCAAGAG GACGTTCTGCCTAGTGCACTGGAAGTTGTTGATGGCTCATTGGCCAACCAGATAGTGTATCTGGCACTGTCACTACGCAG TGATTCGATAACTGAAGTGACGGAGAGTACCTCATCGGGTAATACCCGCTTTGTGACTCATCGCCATGAGGTGCGAGACA TTCATAGTGAGCAGGGGGATTTTTCTACCATAGATGTCAGCCCTGTACAGATGAAGCTGATGTTTGAAAAAGAGGATCGC AGTGCCTACTCCTCAGTGGCGATAGCTAAAATCTTAGAAAAACGTCCAGATGGTAGTGTGGTTCTGGATCCTAACTTTAT TCCTTGTCATTACAATGTGCTGGGTGTGCCGTTTCTGCATCGATTCATTGGTGAGATGGCAGGGATGATGAGAGAAAGAG CTAAAAATATAGCGGTTAGAATAGGCTCGCCAAGTCAAGGTGGCGTCGCTGATGTGTCAGATTTTATGCTGTTACAAGCA TTAAATCGCATGCAACCTGTACTGCAACACCTCTCACAACTGAAAAGCCTGCATCCAGAGCAACTGTATCAGACATTGGT GAGCATTTGTGGAGAGCTATTCTCCTTTACCGATGACAGTCGAATTGCGCCAATATTTAAACCTTACGATCATGATATGC CGATCACCTCCTTTGGCCAATTGATGAATATGCTACGTCAGTCATTAAGTATCGTCCTTGAGCCTAAAGCCGTGTCCTTA CAGTTACAGAAACGTAAGTACGGATTGATGGTTGCGCCAGTACAAGATCCTGATTTGATCAAAGAGGCTGATTTCATCTT AGCTGTTCGCGCTAAGTTGCCTTTAGAGGAGCTGAAAAAGCTCTTTATTCAACAAACTAAGATCGCTTCCGTTGAGAAGA TCCGCGAGTTGATCTCGTTGCAACTTCCTGGTGTCGGTTTAACTCCGCTACCCGTGGCGCCAAGACAGTTGCCATATCAC GCAGGTTACACCTATTTCCAACTTGATAGGACAAGCCCATCTTGGGAGATGTTACAACACTCAACTGGATTTGCCTTCCA TGTTGCTGGTGAGTTTCCTGAGCTCGAGTTGCAGTTCTGGGCGATAAGGAGCTAG Protein sequence : MSSRNRVIWAEGLFIKPQHFQQQQRYFEYVTDERMTSVNSYLYGISQLELNPEYLGFGRIAIQRAKGVMPDGTVFNIPQE DVLPSALEVVDGSLANQIVYLALSLRSDSITEVTESTSSGNTRFVTHRHEVRDIHSEQGDFSTIDVSPVQMKLMFEKEDR SAYSSVAIAKILEKRPDGSVVLDPNFIPCHYNVLGVPFLHRFIGEMAGMMRERAKNIAVRIGSPSQGGVADVSDFMLLQA LNRMQPVLQHLSQLKSLHPEQLYQTLVSICGELFSFTDDSRIAPIFKPYDHDMPITSFGQLMNMLRQSLSIVLEPKAVSL QLQKRKYGLMVAPVQDPDLIKEADFILAVRAKLPLEELKKLFIQQTKIASVEKIRELISLQLPGVGLTPLPVAPRQLPYH AGYTYFQLDRTSPSWEMLQHSTGFAFHVAGEFPELELQFWAIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec25 | AAQ96719.1 | Aec25 | Not tested | AGI-1 | Protein | 3e-91 | 42 |
| aec25 | YP_851420.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-91 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_2522 | YP_001760894.1 | type VI secretion protein | VFG2082 | Protein | 9e-167 | 71 |
| Swoo_2522 | YP_001760894.1 | type VI secretion protein | VFG2065 | Protein | 4e-102 | 44 |
