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Name : Swoo_2513 (Swoo_2513) Accession : YP_001760885.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3068198 - 3070246 bp Length : 2049 bp Strand : - Note : TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA3427 hypothetical protein DNA sequence : ATGGCGCTTTTAGGCTCCGGATTGCGGTTTCATTTTAAAGCGCAAAGCTTAGCTGATGATAGCTTTGACGTGCTTGATTT CAATTTTATTGAAAGCTTATCGAGTCCTTTTGAAGTTAAGCTCACTCTGCTGAGTCGGCTCGATAATCTGACCCCTGAGG CGATTGTTGATCAAACCGGTTTAATGAGCTGGTCGCAAGGGGAGAGTGTTGAGCGACATGTTCATGGCATCGTCAGTCAG TTCAGTAAAGGTGACAGTGGTCATCATCATACTCAATACAATGTCACTATCGTTCCCGCTTTATCACGCCTGAAATTAAG AAAGAATAGTCGAATATTCCAGCAGCAAAATGTACTTGTCATCATCTCAACCCTGCTAAATGAGATGGGGATAAGTGATT ACGCCTTTAGCTGTGATGCACGATTTGAATCTGAAGTACGTGAGTATTGTGTTCAATACAGTGAAACGGATTTCGAGTTT ATCAGCCGTTTAGCTGCGGAAGTGGGGCTGTTTTACTATTTTGAGCATACTCAAGATGTTCACACACTTATCTTCTGTGA CAGCACAAGTAAATTGAGTGGCTTAAAAAGCCCATTTCCCTATAACGTGCTCAGTGGTGGAGTTGCCGAAAACACCTTTG TTAATCAATTTAGTTACCAACACCAAATTAAGCCCGCTAATATCAGCTTAAAAGATTACAGCTTTAAGAAGCCTCAATAT AGTTTTCTGCAAAGCAGTAAGGGCCAAGAGCTCAAGTTTCAAAAGCCTGACTATGAGCATTTTGATTACCCTGGTCGCTA TAAAGATGATGCTGCTGGGGTTCCTATTACACAAGTTCGTCAAGAATATCTGCGCCGTGATGCTCAAGTTGCCACAGGGC AGAGTAATATTTTGCAGGCTATCCCAGGTTTTAAGTTCGATCTCATTGAACATAATGACCGAGCGCTTAATCGTGACTGG ATATTAACGTCGATTGAACACACTGGTGAGCAGGGGGCGGCAGCTGAAGAGGCAAACACACAAAAGCCCACACGTTACAG TAATCAATTTCATGCAATCCCAGGTAATAACCCTTGGCAGGCTGAGCCAAACAGTAAGCCTTTGGTTACAGGTCCACAAA TTGCCATTGTGGTTGGCCCCAAAAATGAAGAGATATTTTGTGATGAGTTTGGCCGAGTAAAAGTCCAGTTCCCATGGGAC AGATATGGAGAGAGTAACGAGCACTCCAGCTGCTGGGTTCGAGTCAGTCAAGGTTGGGCTGGGGGGCAATATGGCATGAT GGCTGTGCCACGTATTGGTCATGAAGTGATTGTTAGCTTCTTAGAGGGCGATCCCGATCAGCCAATTATTACAGGTAGAG CCTATCACACCACCAATGTAACCCCCTATATCTTGCCTAATCATAAAACCCGAACCGTGATTAAAACCCAGAGTCATAAA GCCGAAGGGTTTAATGAACTGCGTTTTGAAGATGAGGCCAGTCGTGAGCAGATCTATGTTCATGGACAGAAAGATATGGA TATGGTGATTAACAATATTCATAGAGAGGAGATTGGCTACGATCAGCATCTGACTGTTGAACATGACAAATTTGAACTGG TTAAGCAGCACCGCCATACAACAATAGGACAAGATGAGATAGCTCAAGTTGGGCGGGATCATCAAGTCCTTGTTGGACGT AACCTTATTCACCGAGTGGTAGGTATGGTTAAGCGTTATATTGGCGGGGGCATCATTACTCAAATTGATGGTGCTAGCCA GACGAGTATTGCAGCCTCGGAAGAGAAGATAATTGGCGCCAATCAACAGATCAAAGTCGATAACGAGAGCTATCTTAAAG CAAGTAAAATCGTCCTCGAAGCTGGTGATGAACTCACTATTAAAGGTCCCGGTGGCTTTATTAAGATTGATAGCGGTGGT GTGACTATCTCTGGCAGTAAAGTGAAGATAAATGAGGGCGGATCCCCTGGAACAGGGACAGCGCCTAAAGCGGTGAAACC AGAAGAGCCCGCTAAACCTTCAATCCCAGAAACTGCTGATAGGCGTTAA Protein sequence : MALLGSGLRFHFKAQSLADDSFDVLDFNFIESLSSPFEVKLTLLSRLDNLTPEAIVDQTGLMSWSQGESVERHVHGIVSQ FSKGDSGHHHTQYNVTIVPALSRLKLRKNSRIFQQQNVLVIISTLLNEMGISDYAFSCDARFESEVREYCVQYSETDFEF ISRLAAEVGLFYYFEHTQDVHTLIFCDSTSKLSGLKSPFPYNVLSGGVAENTFVNQFSYQHQIKPANISLKDYSFKKPQY SFLQSSKGQELKFQKPDYEHFDYPGRYKDDAAGVPITQVRQEYLRRDAQVATGQSNILQAIPGFKFDLIEHNDRALNRDW ILTSIEHTGEQGAAAEEANTQKPTRYSNQFHAIPGNNPWQAEPNSKPLVTGPQIAIVVGPKNEEIFCDEFGRVKVQFPWD RYGESNEHSSCWVRVSQGWAGGQYGMMAVPRIGHEVIVSFLEGDPDQPIITGRAYHTTNVTPYILPNHKTRTVIKTQSHK AEGFNELRFEDEASREQIYVHGQKDMDMVINNIHREEIGYDQHLTVEHDKFELVKQHRHTTIGQDEIAQVGRDHQVLVGR NLIHRVVGMVKRYIGGGIITQIDGASQTSIAASEEKIIGANQQIKVDNESYLKASKIVLEAGDELTIKGPGGFIKIDSGG VTISGSKVKINEGGSPGTGTAPKAVKPEEPAKPSIPETADRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-120 | 41 |
