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Name : Swoo_2479 (Swoo_2479) Accession : YP_001760851.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3026202 - 3027488 bp Length : 1287 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATCCAAAATTTTTGCGTAATGAATTAGAGGCAACGGCGGAAAGCCTAGCCACCCGTGGTTTTATTCTGGATGT AGAGCGTCTGAGTAAGTTAGAGGAAAAGCGTAAGTCACTTCAGGTGGCTACCGAAGAGCTACAGGCTTCCCGTAATGCCA TCTCTAAATCTATTGGACAAGCAAAAGCAAAAGGTGAGGATGTTGCGCCTATTATGGCTCAAGTTGGTGACCTTGGCTCG CAACTTGATTCTAAGAAAGCAGAGCTTGCTGAGCTTCTAGAAGAGCTAAACGCAATTGCACTGAGCGTACCTAATCTACC TGATGCATCTGCACCAATCGGCAAAGATGAGAGCGAGAATGTTGAAGTTCGCCGCTGGGGCACAATTAAAGAGTACGGCT TTGAGGTTAAAGACCATGTTGAACTTGGTGAAACTTTAGGCGGCTTAGACTTTAAGTCAGCAGTTAAGATCACGGGTTCT CGTTTCATTATCATGAAAGGCCAAATTGCGCGTATGCACAGAGCATTAGCCCAATTTATGCTAGATCTGCACACGACAGA GCATGGTTATACTGAAACTTATGTTCCTTTATTAGTCAACGAAGATAGCTTGATGGGAACAGGTCAACTACCAAAATTTG GTGAAGACCTTTTCCACACTAAACCTGCAACTGAAGAGGGGCAGGGACTGAGCCTTATTCCGACAGCTGAGGTGCCGCTG ACTAATATCGCTCGTGATACCATCATAGATGAAGCTGAGCTGCCTGTTAAGCTCACCGCTCATACGCCTTGCTTCAGAAG TGAAGCGGGATCCTACGGTCGTGATACTCGCGGTCTTATTCGCCAACATCAATTTGATAAGGTTGAGCTTGTCCAGCTAG TGAAGCCTGAAGATTCAATGGCGGCGCTAGATGCGTTAACTGGCCACGCCGAAAAGGTACTTGAGAAACTTGGTCTGCCA TACCGCACCGTTATTCTATGTACCGGTGATATGGGTTTTGGTTCAAGTAAAACTTTCGATATTGAAGTGTGGTTGCCAGC GCAAAATACATACAGAGAGATCTCATCTTGCAGTAATATGCAGGACTTCCAGGCTCGCCGTATGCAAGCGCGTTATAAAG CTGCTGATGCTAAGAAACCAGCTTTACTGCATACCTTAAATGGCTCAGGTTTGGCTGTTGGACGTACTTTAGTTGCTGTG CTTGAAAACTATCAGAATGAAGATGGATCAATTACAGTACCAGAGGTTCTTCGCCCATACATGGGTGGATTAGAGAAGAT TGGTTAA Protein sequence : MLDPKFLRNELEATAESLATRGFILDVERLSKLEEKRKSLQVATEELQASRNAISKSIGQAKAKGEDVAPIMAQVGDLGS QLDSKKAELAELLEELNAIALSVPNLPDASAPIGKDESENVEVRRWGTIKEYGFEVKDHVELGETLGGLDFKSAVKITGS RFIIMKGQIARMHRALAQFMLDLHTTEHGYTETYVPLLVNEDSLMGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNIARDTIIDEAELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMAALDALTGHAEKVLEKLGLP YRTVILCTGDMGFGSSKTFDIEVWLPAQNTYREISSCSNMQDFQARRMQARYKAADAKKPALLHTLNGSGLAVGRTLVAV LENYQNEDGSITVPEVLRPYMGGLEKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-104 | 55 |
