Gene Information

Name : Swoo_2042 (Swoo_2042)
Accession : YP_001760421.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2509074 - 2509820 bp
Length : 747 bp
Strand : +
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_2624 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence : 
ATGAGTGTAAGTATAGATTTAGCTGGAAAAGTGGCGTTAGTAACAGGGGCTAGCCGTGGTATTGGCCGTGCGGTTGCTGA
AACACTGGTTGCAGCTGGTGCAAGAGTTGTTGGCACAGCGACAAGTGAGCGTGGTGCTGCCGCAATTCAAGAATACCTCG
GTGATAATGGTCTAGGTCTTGTTTTAAATGTAACAGATGGTCAATCTGTTACCGATCTTTTTGCTGCTATCAAAGAGAAA
GAGGGCGATGTTAACATTTTAGTAAATAATGCCGGAATTACTCGAGATAATTTATTGATGAGAATGAAAGACGATGAATG
GGGTGATATCATAGATACGAACCTGACATCGATATTTCGTACATCAAAAGCGGTTATGCGCCCTATGATGAAAAAACGTC
ATGGACGCATCATTAATATCGGTTCTGTTGTAGGCTCTATGGGGAATCCTGGCCAAACAAACTATTGTGCAGCTAAAGCT
GGGTTGATAGGATTTACAAAATCTCTTGCAAAGGAGGTTGCATCTCGTCAAATAACAGTGAATGCTATTGCTCCTGGATT
TATTCAGACGGACATGACCGATGAGCTGACTGAAGAGCAGCAACAAGGTATCATGTCTCAGGTGCCGATGGAGAGACTTG
GGCAAGCACAAGAGATCGCTAATGCTGTGCTGTTTTTGGCTTCAGACTCTGCTGCGTACATCACTGGAGAGACTCTCCAT
GTGAATGGCGGCATGTATATGGTTTAA

Protein sequence : 
MSVSIDLAGKVALVTGASRGIGRAVAETLVAAGARVVGTATSERGAAAIQEYLGDNGLGLVLNVTDGQSVTDLFAAIKEK
EGDVNILVNNAGITRDNLLMRMKDDEWGDIIDTNLTSIFRTSKAVMRPMMKKRHGRIINIGSVVGSMGNPGQTNYCAAKA
GLIGFTKSLAKEVASRQITVNAIAPGFIQTDMTDELTEEQQQGIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-28 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-28 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-28 44
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-28 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-29 43