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Name : Swoo_1655 (Swoo_1655) Accession : YP_001760036.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2052218 - 2053246 bp Length : 1029 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: son:SO_3189 polysaccharide biosynthesis protein DNA sequence : ATGTCTCGTTACGAACAAATTCAACAAGAACTTATAGATTCTCCTAAAACTTGGTTAGTGACGGGAGTTGCAGGGTTTAT AGGCTCAAACCTGTTAGAGAAATTGCTTAAACTAAATCAAACTGTAGTAGGGTTAGATAACTTTGCGACGGGTCATCAAC ATAACTTGGATGAAGTAAAAAGTTTAGTTACTGAAGAACAATGGGAACGTTTTACCTTTATAGAAGGTGATATCCGCGAT TACAGCACTTGTGAGGAATCTGTAAAAGGTGTGGACTATGTATTACATCAGGCGGCGCTAGGCTCTGTCCCTCGTTCGAT TGCTGATCCAATTACATCAAATGCAACTAATATCACAGGGTTCTTGAATATGCTGCAAGTAGCAAAAGCAGCTAAGGTAG AAAGTTTTACCTATGCGGCCAGCAGCTCAACATACGGTGACCATCCAGCACTACCGAAGGTTGAAGATAACATTGGTAAC CCTCTTTCTCCTTATGCAGTTACGAAATATGTTAATGAACTCTATGCTAATGTGTTTGCCAAAACATATGGTTTTAAAAC AATTGGTTTACGTTACTTTAATGTATTTGGTCAACGCCAAGATCCAAATGGTGCTTACGCAGCGGTAATTCCTAAATGGG CTTCTGCAATGATTCAAGGTGATGAAATTTTTATAAATGGAGATGGAGAAACCAGTAGAGATTTCTGCTTTATTGAAAAT ACTGTTCAAATGAATTTATTAGCGGCAACAAGCGAGGATATAGCTAAAGATGAAGTTTACAATGTTGCCGTAGGTGACAG AACAACTTTAAATGATTTGTTTACCAATATTCAATCTTCATTAAACAAAAGTGGAAGCATATATAGTATTGCTCCTAGTT ATAGAGCGTTTAGAAATGGGGATGTTCGTCATTCGCAGGCCGATATTTCCAAGGCAAAGCAAAAGTTAGGTTATTCGCCA GAGTTTAATATTTCTCAGGGAATAGCCAAAGCAATGCCATGGTACTTGGGGTTTTTAAATAATAGATGA Protein sequence : MSRYEQIQQELIDSPKTWLVTGVAGFIGSNLLEKLLKLNQTVVGLDNFATGHQHNLDEVKSLVTEEQWERFTFIEGDIRD YSTCEESVKGVDYVLHQAALGSVPRSIADPITSNATNITGFLNMLQVAKAAKVESFTYAASSSTYGDHPALPKVEDNIGN PLSPYAVTKYVNELYANVFAKTYGFKTIGLRYFNVFGQRQDPNGAYAAVIPKWASAMIQGDEIFINGDGETSRDFCFIEN TVQMNLLAATSEDIAKDEVYNVAVGDRTTLNDLFTNIQSSLNKSGSIYSIAPSYRAFRNGDVRHSQADISKAKQKLGYSP EFNISQGIAKAMPWYLGFLNNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 8e-111 | 64 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 8e-111 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_1655 | YP_001760036.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 4e-111 | 64 |
