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Name : Swoo_1654 (Swoo_1654) Accession : YP_001760035.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2050811 - 2052091 bp Length : 1281 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: son:SO_3190 polysaccharide biosynthesis protein DNA sequence : ATGATTGTATCACTAGACAATGTGAAAATTGGTATTATTGGTTTAGGCTATGTTGGGCTTCCTTTGGCTGTTGAGTTTGG TAAAAAAAGCCCTACGATAGGTTTCGACATAAATGAAGGGCGTATATCAGAGTTATCATATGGCCATGACAGCACACTTG AGTGCAGTCATCAGGAGCTCGCTGAAGCAACTTGTCTTCGTTACACAGCATCTTTATCAGACCTAAAAGAATGTAATGTG TACATTGTTACCGTACCAACGCCAATAGATGAGCATAAGCAACCTGATTTGACTCCACTAGTAAAAGCATCTGAAGCTTT GGGTGCTGTTGTCAGTGAAGGTGATATCATTATATATGAGTCAACCGTATATCCTGGTGCGACTGAAGAAGAGTGCATCT CGGTAGTCGAAAAAGTCTCTGGATTGAAATTCAACCAAAACTTTTTTGCTGGCTATTCACCTGAAAGAATCAATCCTGGT GATAAAGAGCATCGCGTCACTAACATATTGAAGGTAACCAGTGGTTCAACTCCTGAAGTAGCTGAATTTGTAGACCAACT ATATAAAAGCATTATTGTTGCCGGAACACATAAAGCATCGTCTATAAAAGTTGCCGAAGCTGCAAAAGTGATAGAGAACA CCCAGCGGGATGTCAATATTGCATTGATCAATGAGCTTTCAATTATCTTTAACAAATTGGATATTGATACGCTAGAAGTG CTTGAAGCTGCGGGTACTAAATGGAACTTCTTGCCGTTCCGCCCAGGTCTAGTAGGTGGACACTGTATTGGTGTCGACCC TTACTACCTAACTCATAAAGCTCAAACTGTTGGATATCATCCTGAAATGATCCTAGCTGGCCGAAGACTAAACGATGGTA TGGGCCAATACGTAGTTTCACAACTTGTTAAGAAAATGCTTAAGAAACGTCTCCATGTAGAAGGTGCCAATGTACTAGTT ATGGGGTTAACATTTAAAGAAAATTGTCCTGACTTACGTAACACCAAAGTGGTCGACATTGTATCAGAGTTGAAGGAATA CAATATAAATGTCGATATAGTTGACCCTTGGTGTTCAAATGATGAGGCCGAGCATGAGTATGGGCTGTCGTTATGTGAAA AGCCAAAAGCGAATAACTATGATGCGATTATTATGGCTGTTGCCCACAATGAGTTTAGAGAAATGGGTGCTGAAAAAATT CATGTTTTAGGTAAAACTGAACACGTATTATACGATCTAAAGTACATACTCGATAAAGAAAGCGTAGATATGCGTTTATA A Protein sequence : MIVSLDNVKIGIIGLGYVGLPLAVEFGKKSPTIGFDINEGRISELSYGHDSTLECSHQELAEATCLRYTASLSDLKECNV YIVTVPTPIDEHKQPDLTPLVKASEALGAVVSEGDIIIYESTVYPGATEEECISVVEKVSGLKFNQNFFAGYSPERINPG DKEHRVTNILKVTSGSTPEVAEFVDQLYKSIIVAGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLDIDTLEV LEAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQTVGYHPEMILAGRRLNDGMGQYVVSQLVKKMLKKRLHVEGANVLV MGLTFKENCPDLRNTKVVDIVSELKEYNINVDIVDPWCSNDEAEHEYGLSLCEKPKANNYDAIIMAVAHNEFREMGAEKI HVLGKTEHVLYDLKYILDKESVDMRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-138 | 64 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-138 | 64 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-112 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_1654 | YP_001760035.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-138 | 64 |
