Gene Information

Name : Swoo_1521 (Swoo_1521)
Accession : YP_001759904.1
Strain : Shewanella woodyi ATCC 51908
Genome accession: NC_010506
Putative virulence/resistance : Unknown
Product : cyclase/dehydrase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2867
EC number : -
Position : 1897082 - 1897519 bp
Length : 438 bp
Strand : +
Note : PFAM: cyclase/dehydrase; KEGG: sse:Ssed_1408 cyclase/dehydrase

DNA sequence :
ATGCCCCAGATATCCCGCAGTGTGTTAGTACGCTTTAGTGCAATGCAGATGTATGAAATAGTCAACGATGTAGAGTCCTA
CAAAGAGTTTTTACCAGGCTGTGTAGGTGGGAAAGTGTTAGAGTTTGATGGAAGCACTATGCTTGCATCTGTGGATGTAT
CTAAAGCTGGGATCAGCAAAACCTTTACCACTAGAAATCAGATTGTGCCTGGTAAGAGTATTCAGTTGGCCCTTGAAAAT
GGCCCTTTTAAACATCTTATTGGTGAGTGGCGCTTTACTGAGTTAACCGAAGATGCCTGTAAAATTGATTTCGAACTCAA
TTTCGAATTTTCCAGCAGCTTAGTTGATATGGCTTTCGGTAAAATATTTAATGACCTTATGACCTCTATGGTAACGGCTT
TTACTGGCCGAGCAAAAGTTATCTATAGTGAGCAATAG

Protein sequence :
MPQISRSVLVRFSAMQMYEIVNDVESYKEFLPGCVGGKVLEFDGSTMLASVDVSKAGISKTFTTRNQIVPGKSIQLALEN
GPFKHLIGEWRFTELTEDACKIDFELNFEFSSSLVDMAFGKIFNDLMTSMVTAFTGRAKVIYSEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82716.1 - Not tested VPI Protein 4e-40 62