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Name : Swoo_1382 (Swoo_1382) Accession : YP_001759769.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 1738109 - 1739248 bp Length : 1140 bp Strand : + Note : KEGG: sse:Ssed_1273 diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGAACTGGTCTGTAGAAGATATTGAGATGATGAGCCGCGCCATCAAACTGGCGCGCCAAGGTTTATATACCACGCAGCC AAACCCGTGTGTGGGTTGTGTGGTCACCAAAGATGGACAGATCCTCGGCGAAGGTTTCCATATCAAAGCGGGTGGCCCCC ATGCTGAAGTGCATGCTCTGGCAATGGCAAATAGTGATTCCAATTTAGGGGCCAAAGGCGCAACAGCCTATGTTACCCTT GAGCCATGCAGCCATTATGGTCGTACACCACCCTGTGCTGAAGCCCTTATTCACAATAAGCTTGCTCGCGTTGTCGTTGC AGTTGAAGATCCCAATCCTCAGGTCTGTGGACGTGGTATTGCCATGCTCAGGGATGCTGGTATTCAAGTTGATGTTGGTT TACTTCAAGATGAAGCCTATAAGATCAATCCCGGCTTTATGAAGCGTATGGAGACTGGTCTACCTTGGGTGACGGTTAAA CTGGCTTCGAGCTTAGATGGCAAAACGGCATTAGCCAATGGCGCTTCAAAATGGATCACAGGTCCAGAGGCTCGCCGTGA TGTACAAAGACTTCGTGCCCGTCACTGCGCCTTGGTGACAGGTGTTGAGACCATCTTGGCTGATAATCCATCACTTAATG TTCGCCATAGCGAGTTGGGTTCATTAGCCGATAGGCATAGCGAAAGCGATCTACATCAACCACTTCGCGTCGTATTAGAT AGCCGTGCTCGGGTGACATCAGACTTAGCCCTATTTGCGATTGAGTCGCCCATTCTTCTGGTCTCTTGTGATGATTATCC AGCTATAGAGCAGCAAAGCTGGCCGTCACATGTTAAGCAGGTAAAGTTGAACTGTGATGAGTCTGGGCGTGTGGATCTCA ATGAGCTGTTTAAATATTTAGGAAAGCAGTGTAACTCAGTGCTTATTGAAGCGGGGGCAACTTTGGCAGGGAGTGTTATT GCCAAGGGCCATGGTGATGAGTTGGTGCTTTATCAGGCGCTGAAAATGTTAGGTTCAAGTGGACGTAATCTAATCACACT TCCTGAGTATACAGCCATGTCACAGATACCGGCTATCAAGCTTGTCGATGAACGTAAAGTCGGGGCTGATACCCGCTTAA CTTTAGATATAAGGTCATAA Protein sequence : MNWSVEDIEMMSRAIKLARQGLYTTQPNPCVGCVVTKDGQILGEGFHIKAGGPHAEVHALAMANSDSNLGAKGATAYVTL EPCSHYGRTPPCAEALIHNKLARVVVAVEDPNPQVCGRGIAMLRDAGIQVDVGLLQDEAYKINPGFMKRMETGLPWVTVK LASSLDGKTALANGASKWITGPEARRDVQRLRARHCALVTGVETILADNPSLNVRHSELGSLADRHSESDLHQPLRVVLD SRARVTSDLALFAIESPILLVSCDDYPAIEQQSWPSHVKQVKLNCDESGRVDLNELFKYLGKQCNSVLIEAGATLAGSVI AKGHGDELVLYQALKMLGSSGRNLITLPEYTAMSQIPAIKLVDERKVGADTRLTLDIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-60 | 46 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-60 | 46 |
