|
Name : rplS (Swoo_1257) Accession : YP_001759644.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1594585 - 1594938 bp Length : 354 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAATAACATCATTAAAATGCTCAACGAAGAGCAAATGAAGAAAGATGTACCAGAATTTGGTGCAGGTGACACAGTTGT AGTTAAAGTACGTGTTGTTGAAGGTGGTAAAGAGCGTCTACAGGCGTTCGAAGGTGTTGTAATCGCTAAGCGTAACCGCG GCGTTCACTCTGCATTCACTGTACGTAAAATCTCTAATGGTGAAGGTGTTGAGCGTGCATTCCAAACGCACAGCCCAATC ATCTCTGATATCGAAGTTAAGCGTCGTGGCCGTGTTCGTCGTGCTAAGCTTTACTATCTACGTGAGCGTTCAGGTAAGTC TGCACGTATCCGTGAGAAGCTTTCTACTAAGTAA Protein sequence : MNNIIKMLNEEQMKKDVPEFGAGDTVVVKVRVVEGGKERLQAFEGVVIAKRNRGVHSAFTVRKISNGEGVERAFQTHSPI ISDIEVKRRGRVRRAKLYYLRERSGKSARIREKLSTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 9e-33 | 75 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 6e-23 | 59 |
