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Name : Swoo_1197 (Swoo_1197) Accession : YP_001759585.1 Strain : Shewanella woodyi ATCC 51908 Genome accession: NC_010506 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1529330 - 1530793 bp Length : 1464 bp Strand : - Note : catalyzes the formation of betaine from betaine aldehyde DNA sequence : ATGTCACTAGTTGTTTATCCAAATTATATCCACGGAAAAGCGCTCCATAATGAGAGCGGAGAAACCTTTGAAGTCATTAA TCCAGCCAATGGAAAAGTGAACTATTTAGTTGAAGTTGCCGATGAGAAGATCCAACAAGCCGCCATTGAAAGCGCTAAAG AGGGATTCAAAACTTGGTCAAAGATGACTGCCATGGAGCGCAGTCGCGTTCTACTTAACGCTGTAGCACTGCTTCGGGAG CGAAATGACGAGCTTGCAGCCATTGAAGTACAAGACACAGGAAAACCTTGGCAGGAAGCATCCGTTGTCGATGTGGTTAC CGGAGCGGATTCAATCGAATTCTTTGCAGGACTAGCCCCCAGTATCGAAGGCAATCAGCAGAGTGTCGGCGATGACTTTT ATTATACCCGCCGCGAGCCACTGGGCATCTGTGCAGGTATTGGCGCTTGGAACTACCCACTACAGATAGCTTGCTGGAAA TCAGCACCTGCACTGGCATGCGGTAACGTCATGATCTTTAAGCCATCTGAAGAGACACCACTGGGCGCACTTAAGCTTGC AGAGATCTTTACCCAAGCTGGCGTTCCTGATGGGGTATTTAATGTCGTCCAAGGTGATGGTCGTGTCGGTGCTTGGCTAA CCAATCATGATGAGATTGCCAAAGTCTCTTTCACTGGTGAAGTTGGCACAGGTAAGAAAGTGATGGCGGCAGCAGCGACT TCGCTCAAAGAGGTCACTATGGAGCTCGGCGGCAAGTCACCGTTAATCATCTTCAATGATGCCGATATAGATAATGCGGT GTCAGCTGCCATGTTAGGTAACTTTTATACCCAAGGTGAGATCTGCACTAACGGAACTCGCGTCTTTGTGCAGCAAGATA TCTACCCTAAGTTTATCGAGAAGCTTCTTAAACGTACTCAAGAGAATATCGTGTGTGGCGATCCCATGGATCCTGAGACG AATTTTGGCGCGCTTATCTCTAAAGAGCATCAAAACAAGGTCTTAAATTACATAGAGATTGGTAAATCTGAGGGCGCCGA GCTGCTCGCAGGTGGCCATGCGCTAACCCCTAACAACTGTCCAGGTGGTTACTTTGTTGCCCCAACCATTTTTGGCCAAT GCAGTGACGAGATGACCTTGAGCAGAGAGGAGGTCTTTGGTCCTGTGATGTCCGTGCTGCCATTTAACGATGAAGATGAA GTGATCCGCCGTGCTAACGATACCCGTTTAGGGTTAGCTGCTGGCGTGTTCACCCAAGATATCACCCGTGCCCATCGCGT TATTCATCAGATGCAAGCTGGTATTTGCTGGATCAATGCCTATGGCGCCTCACCAGCCGAGATGCCCGTTGGCGGTTACA AGATGTCGGGAATTGGCCGTGAAAATGGCAGTGAAACCCTAAAAGCTTACACCCAGATCAAAGCGGTTTATGTGGGTATG CAGCCCCTTGAAAGTCCATTTTAA Protein sequence : MSLVVYPNYIHGKALHNESGETFEVINPANGKVNYLVEVADEKIQQAAIESAKEGFKTWSKMTAMERSRVLLNAVALLRE RNDELAAIEVQDTGKPWQEASVVDVVTGADSIEFFAGLAPSIEGNQQSVGDDFYYTRREPLGICAGIGAWNYPLQIACWK SAPALACGNVMIFKPSEETPLGALKLAEIFTQAGVPDGVFNVVQGDGRVGAWLTNHDEIAKVSFTGEVGTGKKVMAAAAT SLKEVTMELGGKSPLIIFNDADIDNAVSAAMLGNFYTQGEICTNGTRVFVQQDIYPKFIEKLLKRTQENIVCGDPMDPET NFGALISKEHQNKVLNYIEIGKSEGAELLAGGHALTPNNCPGGYFVAPTIFGQCSDEMTLSREEVFGPVMSVLPFNDEDE VIRRANDTRLGLAAGVFTQDITRAHRVIHQMQAGICWINAYGASPAEMPVGGYKMSGIGRENGSETLKAYTQIKAVYVGM QPLESPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-73 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-76 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-76 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-76 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swoo_1197 | YP_001759585.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 7e-74 | 41 |
