Gene Information

Name : Mrad2831_5580 (Mrad2831_5580)
Accession : YP_001758208.1
Strain : Methylobacterium radiotolerans JCM 2831
Genome accession: NC_010505
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 5901374 - 5902027 bp
Length : 654 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0815 ABC transporter related

DNA sequence : 
GTGATCCGTTTCGAGAAAGTCAGCAAGGTCTACCGCACGGAGGGCCACCGGCGGACCATCTTGGAGCAGGTGTCGTTCAC
CCTGAAGCCGGGCGTCTCCTACGGCATCCTCGGCATCAACGGCGCCGGAAAATCGACCACGATGCGGCTGATCGCCGGCA
CCGAGGACGCGACGCGGGGCCGGATCCACCGCGGCCTCAGAGTGTCGTGGCCCCTCGGCTTCGCCGGCGGTTTCCATCCC
AAGATGACCGGGCGCGACAACGTCACGTTCGTGGCGCGCATCTACGGCGAGGACCCGCGCAAGGTCCTCGATTTCGTCGA
GGACTTCTCTGAGCTCGGAAGCTACCTCGACGTTCCGATCTACACGTACTCATCCGGCATGGGCGCGCGGCTCGCCTTCG
GTATGAGCATGGCGATCCCGTTCGACTGCTATCTGATCGACGAGATCACCTCTGTCGGCGACGCGCGGTTCTCGAAGCGC
TGCGACGAGGTCTTCTCGCAGCGTCGGAAGAACGCCGACATCATCATGGTCTCGCACTCGATGGAGACGATCCGCCAGTG
GTGCACGCAGGGGCTCGTCCTGCTCAACGGCCGCGCGATCATCTACGAGGACGTGAACGACGCCATCGAGGTGTACCGGC
GCCTCAACGCCTGA

Protein sequence : 
MIRFEKVSKVYRTEGHRRTILEQVSFTLKPGVSYGILGINGAGKSTTMRLIAGTEDATRGRIHRGLRVSWPLGFAGGFHP
KMTGRDNVTFVARIYGEDPRKVLDFVEDFSELGSYLDVPIYTYSSGMGARLAFGMSMAIPFDCYLIDEITSVGDARFSKR
CDEVFSQRRKNADIIMVSHSMETIRQWCTQGLVLLNGRAIIYEDVNDAIEVYRRLNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-48 50
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-47 46
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrad2831_5580 YP_001758208.1 ABC transporter-like protein VFG0258 Protein 8e-49 50
Mrad2831_5580 YP_001758208.1 ABC transporter-like protein VFG0696 Protein 6e-49 47
Mrad2831_5580 YP_001758208.1 ABC transporter-like protein VFG2563 Protein 1e-48 46
Mrad2831_5580 YP_001758208.1 ABC transporter-like protein VFG1449 Protein 3e-48 46