Gene Information

Name : Mrad2831_5050 (Mrad2831_5050)
Accession : YP_001757691.1
Strain : Methylobacterium radiotolerans JCM 2831
Genome accession: NC_010505
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 5365475 - 5366242 bp
Length : 768 bp
Strand : -
Note : KEGG: mex:Mext_0427 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence : 
ATGCGCCGGACGCGCGAGGTCCCGAAGCCGCGCCTGCTGCGGATCGCGCTCGCCGCACTGGGCGCGGTGGCCGGAGGACT
GCTCGCCGCCGGACCGGCCGTCGCGCAGAGCGTCACCCTCGATCTCGGTGCCGGCGGCACCACCGAGCGCGCTCTCCAGC
TCGTGGCGCTCATCACCGTCCTGGCGGTGGCCCCCTCGGTGCTGGTGATGGCCACGGCCTTCACCCGCATCGTCGTGGTG
CTGTCGATCCTGCGGTCGGCGCTGGGCACCCAGACGGCGCCGCCGACCGCGGTGCTCGTCAGCCTCGCGCTGTTCCTGAC
CGCCTTCGTGATGGCCCCGACCGGCCGCGCCGCCTACAGCGCCGGCATCGAGCCGCTGATCGCCGGCCGGATCACGCAGG
CGCAGGCGTTCGAGCGCGCCTCGGCACCGTTCAAGACCTTCATGCTGCGCAACGTCCGCGAGAAGGACCTGAAGCTGTTC
CTCGACCTCGCCAAGGTGCCGGCGCCGAAGGGCCCCGAGGATGTCGGCCTGGAGATCGTGACACCGGCCTTCATGATCTC
GGAACTGCGCCGCGCCTTCGAGATCGGCTTCCTGCTGTTCATCCCGTTCCTGATCATCGACCTCGTGGTCGCCTCGGTGC
TGATGGCCGTCGGCATGATGATGGTCCCGCCGGCCACGGTCGCACTGCCGTTCAAGCTGATCTTCTTCGTGCTGGTCGAC
GGCTGGACCCTCGTCGCCGGATCCCTGGTCCAGAGCTACGGCGGATGA

Protein sequence : 
MRRTREVPKPRLLRIALAALGAVAGGLLAAGPAVAQSVTLDLGAGGTTERALQLVALITVLAVAPSVLVMATAFTRIVVV
LSILRSALGTQTAPPTAVLVSLALFLTAFVMAPTGRAAYSAGIEPLIAGRITQAQAFERASAPFKTFMLRNVREKDLKLF
LDLAKVPAPKGPEDVGLEIVTPAFMISELRRAFEIGFLLFIPFLIIDLVVASVLMAVGMMMVPPATVALPFKLIFFVLVD
GWTLVAGSLVQSYGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-25 44
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-23 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-14 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-14 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-14 41
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-22 41
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-23 41
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 7e-11 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 6e-09 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 5e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-46 55
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-42 54
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-39 51
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-36 47
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG0394 Protein 3e-27 45
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG0044 Protein 6e-24 43
Mrad2831_5050 YP_001757691.1 flagellar biosynthetic protein FliP VFG0188 Protein 5e-27 42