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Name : serS (UPA3_0109) Accession : YP_001752189.1 Strain : Ureaplasma parvum ATCC 27815 Genome accession: NC_010503 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 135162 - 136418 bp Length : 1257 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTTGATATTAATTTAATACGAAAAGATATTGCAACTACTAAAGAAAAGATGTTAAATAAAAAGGTGCCAAGCAATTT GTTTGATCAAATTTTTGATTTAGATGTTTTAGTACGAAGTTTAATGCAACAAGAACAAAATCTTAATGCTAAGAAAAATC AATTATCAAAAGAAATTGGTATTTTAGCTAAAAACAAAGATCCTAAATTACAACAAACATTAGATTTAGTTAATAATATT AAAAACGAATTGCAAGATATTTCATTAACATTATCAAACAAACAAGATGAATTAAATAAATTATTATTAGTAATTCCTAA TATGCCAGATGATTCAGTGCCCATTGGCAATGATGAAAATGACAACGTCGAAATTAAAAAAGTTTTTAAACCAAAAAAAT TTGATTTTTTACCCCTTGCGCATTGAGATTTAGCAGTAAAAAACAAGTTAATTGATTTTGATAAATCAACAAAAATTACT GGTAGTCGTTTTATTATTTATACTAATTTTGGTGCACGTTTATATCGTGCTTTACAACAATTTTGTTTAGATATGAATGT AAAAGCAGGTTTTAGTGAAATTTGAGCACCTGTTATTGTTAATCAAGAATCTTTAATTGGTTCTGGAAACTTACCTAAAT TTGCAGATGATTTATTCAAATTAGAAAATTCAAATTATTATTTATCACCAACTGCTGAAGTGCAATTAACAAATTTACAT CGTAATGAAATTTTAAAAGCTAGTGATTTACCTTTATACTATACAGCTCTAACACCTTGTTTTCGTAGTGAAGCAGGATC TGCAGGACGCGATGTTAGAGGTGTAATTCGTCAACACCAATTCCATAAAGTAGAATTAGTAAAATTATGTAAACCAGAAG ATAGTTTTAAAGAATTAGAATCAATGACAAGACAGGCTGAAAGTATTTTAGAAGCTTTAGAATTACCTTATAGAAGAATC GTTTTATGCACAGGCGATTTAGGTTTTAGTTCAGCTAAAACATATGATTTAGAAGTTTGATTACCATCATATAACGCTTA TAAAGAAATTTCAAGTTGTTCAAATTGCACTAATTTCCAAGCGCGTCGTGCAAAAATTCGTTATAAAGAAACAATTGATG CAACAACCGAATTAGTTCATACATTAAACGGATCATCATTAGCAATTGATCGATTATGGGCTGCAATTGTTGAAAATTAT CAACAAGAAGATGGTAGTATCAACATTCCTAAAGTATTAAAAAAATACATCTATTAA Protein sequence : MFDINLIRKDIATTKEKMLNKKVPSNLFDQIFDLDVLVRSLMQQEQNLNAKKNQLSKEIGILAKNKDPKLQQTLDLVNNI KNELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDENDNVEIKKVFKPKKFDFLPLAHWDLAVKNKLIDFDKSTKIT GSRFIIYTNFGARLYRALQQFCLDMNVKAGFSEIWAPVIVNQESLIGSGNLPKFADDLFKLENSNYYLSPTAEVQLTNLH RNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKELESMTRQAESILEALELPYRRI VLCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTNFQARRAKIRYKETIDATTELVHTLNGSSLAIDRLWAAIVENY QQEDGSINIPKVLKKYIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-100 | 49 |
