Gene Information

Name : PputW619_0969 (PputW619_0969)
Accession : YP_001747843.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1067002 - 1067685 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4458 response regulator ColR

DNA sequence : 
ATGCGCATTCTTTTGGTTGAAGACAACCGCGATATCCTTGCCAACCTGGCTGATTATCTGGGCATGAAGGGCTACACCGT
CGACTGCGCCCAGGACGGCCTGTCAGGTTTGCACCTGGCTGCCACCGAGCATTACGACCTTATCGTGCTCGATATCATGC
TGCCTGGAATCGACGGTTACACCCTGTGCAAGCGCCTGCGCGAGGATGCCCGTCGCGATACGCCAGTGATCATGCTGACC
GCCCGCGACCAACTCGACGACCGCCTGCAGGGCTTCCGCTCCGGCGCCGACGATTACCTGCTCAAACCGTTCGCCCTGTC
CGAACTCGCCGCGCGCATCGAAGCCGTGCTGCGTCGCGCCCAGGGTGGCGGGCGGCGCACCCTGCAGGTTGCCGACCTGA
GCTACGACCTTGATACCCTCGAAGTCACCCGCCAGGGGCGCTTGCTCAAGCTCAACCCTGTCGGCCTCAAGCTGCTCGCC
GTGCTGATGCAGAAAAGCCCCCACGTGTTGCGCCGCGAGGTACTGGAAGAGGCGTTGTGGGGTGATGATTGCCCCGACAG
CGACAGCTTGCGCAGCCATGTACACCAGCTGCGCCAAGTAATCGACAAACCGTTCGAAAAGCCGTTGCTGCATACCGTCC
ATGGCGTCGGCTATCGCCTCGCCGAGGGTCGCGATGGAGTTTAA

Protein sequence : 
MRILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTLCKRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRAQGGGRRTLQVADLSYDLDTLEVTRQGRLLKLNPVGLKLLA
VLMQKSPHVLRREVLEEALWGDDCPDSDSLRSHVHQLRQVIDKPFEKPLLHTVHGVGYRLAEGRDGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_0969 YP_001747843.1 two component transcriptional regulator BAC0197 Protein 2e-35 43
PputW619_0969 YP_001747843.1 two component transcriptional regulator BAC0125 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_0969 YP_001747843.1 two component transcriptional regulator VFG0596 Protein 1e-33 42
PputW619_0969 YP_001747843.1 two component transcriptional regulator VFG1390 Protein 3e-31 41