Gene Information

Name : PputW619_0597 (PputW619_0597)
Accession : YP_001747471.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 653555 - 655075 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN0634 NAD+ dependent aldehyde dehydrogenase

DNA sequence :
ATGCGTTATGCACATCCCGGTACCGAGGGCGCGAAGGTTTCCTTCAAGAGCCGCTACGGCAACTACATCGGTGGTGAATT
CGTAGCTCCGGTCAAGGGGCAGTATTTCGACAACACCTCCCCGGTGAATGGCAAGCTGATCGCTGAATTTCCCCGCTCCA
CTGCCGAAGACATCGACAAGGCGCTCGACGCCGCCCACGCTGCCGCCGATGCCTGGGGCCGCACCTCGGTGCAGGACCGC
TCCAACGTGCTGCTGAAGATCGCCGACCGCATCGAGCAGAACCTGGAAGTGCTGGCCATCACCGAAACCTGGGACAACGG
CAAGCCGGTCCGCGAAACCCTCAACGCCGACATTCCGCTGGCGGTCGATCACTTCCGCTACTTCGCCGGCTGCATACGCG
CCCAAGAGGGCGGTGCCGCCGAGATCAACGAAAATACCGTGGCCTATCACATCCATGAGCCACTGGGCGTCGTCGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAACTGGCCCCGGCCCTGGCCGCTGGCAACTGCGTGGTGCT
CAAACCGGCCGAGCAGACCCCGCTGGGCATCACCGTGCTGGTAGAGCTGATTGGCGACCTGCTGCCGCCCGGCGTGCTCA
ATGTAGTCCAGGGCTATGGCCGCGAGGCCGGCGAAGCACTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGT
TCTACCCCGGTCGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCTACCGTGGAGCTGGGCGGCAAATC
ACCCAACGTCTACTTCGAAGACATCATGCAGGCCGAGCCGAGCTTCATCGACAAGGCGGCCGAAGGCATGGTGCTGGCGT
TCTTCAACCAGGGCGAGGTATGTACCTGCCCGTCGCGGGCGTTGGTGCAAGAGTCGATCTACCCGCAGTTCATGGAAGTG
GTGATGAAGAAGGTGCTGCAGATCAAGCGCGGCGACCCGCTCGACACCGACACCATGGTCGGCGCCCAGGCTTCGCAACA
GCAGTTCGAAAAAATCCTGTCGTATTTGCAGATCGCCCAGGACGAAGGCGCCGAACTGCTGACCGGCGGCAAGGTGGAGA
AGCTGGAAGGCGCGTTGGCGACCGGTTACTACATCCAGCCGACGCTGCTCAAAGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTAGTCAGCGTCACCACCTTCAAGGACGAGGCCGAGGCACTGGCCATCGCCAACGACACCGA
GTTCGGCCTTGGCGCCGGTGTATGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGCGGCATCAAGGCTGGCCGCG
TATGGACCAACTGCTACCACCTGTACCCGGCGCACGCCGCGTTCGGCGGGTACAAGAAGTCCGGCGTGGGCCGTGAAACC
CACAAGATGATGCTCGACCACTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGCTGGGCTTCTTCTA
A

Protein sequence :
MRYAHPGTEGAKVSFKSRYGNYIGGEFVAPVKGQYFDNTSPVNGKLIAEFPRSTAEDIDKALDAAHAAADAWGRTSVQDR
SNVLLKIADRIEQNLEVLAITETWDNGKPVRETLNADIPLAVDHFRYFAGCIRAQEGGAAEINENTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLVELIGDLLPPGVLNVVQGYGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNVYFEDIMQAEPSFIDKAAEGMVLAFFNQGEVCTCPSRALVQESIYPQFMEV
VMKKVLQIKRGDPLDTDTMVGAQASQQQFEKILSYLQIAQDEGAELLTGGKVEKLEGALATGYYIQPTLLKGNNKMRVFQ
EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-151 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-158 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-158 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-158 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-158 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_0597 YP_001747471.1 aldehyde dehydrogenase VFG0082 Protein 3e-151 66