|
Name : PputW619_0567 (PputW619_0567) Accession : YP_001747441.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 625051 - 626181 bp Length : 1131 bp Strand : + Note : KEGG: pen:PSEEN0588 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGCCGAGCGAGACCGCGATCCTCGACGCCCATTACATGGCCCGTGCCCTGGAGCTTGCCCGCAAGGGCATCTACACCAC TCACCCCAACCCGCGCGTGGGTTGTGTGATCGTCCGTGACGGCGAAGTGGTGGGTGAGGGCTGGCATGTGCGCGCCGGTG AACCACATGCCGAGGTACATGCCCTGCGCCAGGCCGGTGAGCGTGCCCGCGGCGCCTGTGCCTACGTGACGCTCGAGCCT TGCAGCCACCATGGCCGCACCCCACCGTGCGCCGAAGCGCTGGTACAGGCAGGCGTAGCGCGGGTGGTGGCAGCCATGCA GGACCCCAACCCGCAAGTCGCCGGGCAGGGCCTGCGCCGCCTGGCCGAAGCGGGCATCGAAGTCGCCAGCGGCGTGCTCG AAGCCCAGGCCCGTGCCCTGAACCCCGGTTTCCTGAAGCGCATGGAGCATGGCTTGCCGTTCGTGCGGGCCAAGCTGGCC ATGAGCCTGGATGGCCGCACCGCAATGGCCAGCGGCGAAAGCCAATGGATCACCGGCCCTGCCGCCCGCTCTGCAGTGCA GCGCTTGCGTGCCAGTGCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCCGACAACGCACGGATGACCGTGCGCG GTGCCGAGTTGGGCCTGGACCCCGACGCCACCGCGCTGGCGCTGAGCCGCACCCCCCTGCGCGTGCTGATCGATGGCCGC CTGCGCCTGCCGCTGGACGCGCCGTTCTTCCAGGCCGGCCCTGCCCTGGTGGTAACCGCCATGGGGGACGATACGCGGTA CGGCCAGGCTGGCCACGAGCTGCTCAGCCTGCCGGGCAGCAATGGCCAGGTCGATCTGCTCGCCTTGATGCAGGCACTTG CAGCGCGTGGCGTCAACGACATCCTGCTGGAAGCCGGCGCTGGCCTGGTCGGCGCTTTTGCCCAATTGGGCCTGATCGAC GAGTACCAGCTGTTCGTCGCCGGCACCTTCCTTGGCTCCCAGGCCCGTCCGTTGCTGGACTGGCCACTGTCGAAGATGAG CGAAGCGCCACGGCTGAAAATCACCGAAATGCGTGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCTCTGCCGGCGC CCGGCGTATAA Protein sequence : MPSETAILDAHYMARALELARKGIYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGERARGACAYVTLEP CSHHGRTPPCAEALVQAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAQARALNPGFLKRMEHGLPFVRAKLA MSLDGRTAMASGESQWITGPAARSAVQRLRASASVVLTSAASVLADNARMTVRGAELGLDPDATALALSRTPLRVLIDGR LRLPLDAPFFQAGPALVVTAMGDDTRYGQAGHELLSLPGSNGQVDLLALMQALAARGVNDILLEAGAGLVGAFAQLGLID EYQLFVAGTFLGSQARPLLDWPLSKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-60 | 50 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-60 | 50 |
