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Name : PputW619_5015 (PputW619_5015) Accession : YP_001751860.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 5540224 - 5541909 bp Length : 1686 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: pen:PSEEN5305 type II secretion system protein E DNA sequence : ATGCACAACCCCGACGATCGATCCCTCGACCTCAAGCGCGTGCTGGACACGTTGCAAGCCGACCAGCGCCTGAGCGCCAA CGACGCTAGGCAAGTACTCGAATACGCCAACTCACAGCCACCTCGCCATCCGCTCGAAACCGTAGCGGCCCTGGGCCTCG AAGACCGCCAGCACCCCGGCCAGCGCCTGCATCTGGACTGCCTGTGCCAATGGCTCGCCAGAAAAGTCGGGCAGCCTTAC CAGCGTATCGACCCACTGCAACTCGACCTGTCTCAGGTCAACGGGCTGATATCGCCAGCATTCGCCCATCGCCACGGCAT ACTCATCCTGGCCAGCGACAGCCTGGGCATCACCGTGGCCAGTGCGCAGCCTTACCAGTGTGACTGGCAAACCGATCTGG CCCGCAGCCTGGGCAAGCCGATCCGCCGCGTGCTCGCCAGCCCCCTGCAGTTGCGCCAGGTGGGCCAGTCGTTGTCTCGC CTCGCCCACTCGGTGCAAGGCGCCCAGCATCAGCAGTCGGCAAGCCTGGGTGAGCTGGAGCAGTGGCTGGAGCAGGACAA GCGCCAGGGCAACGCCACGGCAGACGACGCGCATATCGTGCACATCGTCGACTGGCTGCTGCAGTACGCTGTCGAACAGC GCGCCAGTGACATCCATCTTGAGCCGCGCAGCGAGCAGGGCCGATTGCGTTATCGCATAGACGGCCTCCTGCATACGGTC TACGCCTTCCCGGCCAGCGTGACCCTGGCCGTCGTCAGCCGCCTGAAGCACTTGGGCCACATGGATGTCGCGGAGAAACG CCGGCCGCAGGATGGCCGCATGAAGTGCAGCCTGCCAGGTGGCCGCGAAGTGGAATTGCGCCTGTCTACCCTGCCCACCC CCTTTGGCGAAAAGCTGGTACTGCGGTTGTTCGACCCACAACAGCTACAGGAAGACTTCGACCGCCTGGGCCTGGAAGGT GAACAACTGCAGCAGTGGCAGGCCCTGCTGCAGCGCCGTCATGGCATGCTGCTGGTCACCGGCCCTACCGGTTCAGGCAA GACCAGCACGCTTTACGCAAGCCTGAAGCGGCTGGCCACACCCGAGGTCAACTTGTGCACCATCGAAGACCCGATCGAAC GCCTGGAGCCGGCGTTCAATCAATTACAGGTGCAGCCGACACTGGACCTCAGCTTCGCCAACGGTGTACGCGCGCTGCTG CGCCAAGACCCTGACATCATCATGATCGGCGAGATCCGCGATCGCGAGACGGCTCTGGTAGCCGTGCAAGCTGCCCTTAC CGGACACCTGGTGCTCTCGACCCTGCACACCAACGACAGCTGTGGGGCCATTACCCGCCTGCTGGAACTGGGCGTGCCCG ATTACCTGATCAAGGCCTCCCTGAGTGGGGTGATGGCACAGCGCCTGGTACGCGTGCTGTGCCGTGAGTGCCAGGGCTGC GCAGCATCGGCCAGCGGCCAGCCTTGCCTGATGTGCCGGGGCACCGGCTTTGATGGTCGAACGGGCGTGTTCGAGCTACT GGTCCCGAGCGAAAGCCTGCGCGCCCGGATAGGCGCCGGAGCGGACCTTGCCAGCTTGCGGCGACAGGCATTGAGCGAAG GGTTGCTGGACCTGAAACGCTGCGGGGAGGCAAAAGTGGCCCGTGGACTGACCTGCCAAGAGGAAGTGCTGCGGGTCTGC ACATGA Protein sequence : MHNPDDRSLDLKRVLDTLQADQRLSANDARQVLEYANSQPPRHPLETVAALGLEDRQHPGQRLHLDCLCQWLARKVGQPY QRIDPLQLDLSQVNGLISPAFAHRHGILILASDSLGITVASAQPYQCDWQTDLARSLGKPIRRVLASPLQLRQVGQSLSR LAHSVQGAQHQQSASLGELEQWLEQDKRQGNATADDAHIVHIVDWLLQYAVEQRASDIHLEPRSEQGRLRYRIDGLLHTV YAFPASVTLAVVSRLKHLGHMDVAEKRRPQDGRMKCSLPGGREVELRLSTLPTPFGEKLVLRLFDPQQLQEDFDRLGLEG EQLQQWQALLQRRHGMLLVTGPTGSGKTSTLYASLKRLATPEVNLCTIEDPIERLEPAFNQLQVQPTLDLSFANGVRALL RQDPDIIMIGEIRDRETALVAVQAALTGHLVLSTLHTNDSCGAITRLLELGVPDYLIKASLSGVMAQRLVRVLCRECQGC AASASGQPCLMCRGTGFDGRTGVFELLVPSESLRARIGAGADLASLRRQALSEGLLDLKRCGEAKVARGLTCQEEVLRVC T |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-64 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-64 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputW619_5015 | YP_001751860.1 | type II secretion system protein E | VFG2426 | Protein | 2e-55 | 44 |
| PputW619_5015 | YP_001751860.1 | type II secretion system protein E | VFG2048 | Protein | 4e-64 | 41 |
| PputW619_5015 | YP_001751860.1 | type II secretion system protein E | VFG1880 | Protein | 2e-63 | 41 |
