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Name : gabD (PputW619_4999) Accession : YP_001751844.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 5521119 - 5522561 bp Length : 1443 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTTCATCAACGGTGAATGGCTGGATGCGGACAGCGGCCAGAC CATCAATGTGACCAACCCGGCCACAGGTGAAGTCATCGGTACCGTGCCGAAGATGGGTACTGCGGAAACCCGCCGCGCCA TCGAAGCTGCCGACAAGGCCCTGCCGGCCTGGCGTGCACTGACCGCCAAAGAGCGCTCGAACAAGCTGCGTCGCTGGTTC GAACTGATGATCGAGAACCAGGACGACCTGGCTCGCCTGATGACCACCGAACAAGGCAAGCCACTGGCCGAAGCCAAGGG CGAAATCGCCTACGCAGCCTCGTTCATCGAGTGGTTCGCCGAAGAAGCCAAGCGCGTCTACGGTGATACCATCCCGGGCC ACCAGCCTGACAAGCGCCTGATCGTCATCAAGCAGCCGATCGGCGTTACCGCGGCCATCACGCCGTGGAACTTCCCGGCG GCGATGATCACCCGTAAAGCCGGCCCGGCCCTGGCCGCTGGCTGCACCATGGTGCTCAAGCCTGCTTCGCAAACCCCGTA CTCTGCCCTGGCCCTGGTCGAGCTGGCTACCCGTGCCGGCATCCCGGCTGGCGTGCTGAGCGTGGTGACCGGCAGCGCTG GCGAAGTTGGCGGCGAGCTGACCGGCAACTCCCTGGTGCGCAAACTGTCCTTCACCGGCTCGACCGAAATCGGTCGCCAG TTGATGGAAGAATGTGCCAAGGACATCAAGAAGGTTTCCCTGGAGCTGGGTGGCAACGCCCCATTCATCGTGTTCGACGA TGCCGACCTGGATAAGGCGGTAGAAGGCGCGATCATCTCCAAGTACCGCAACAACGGCCAGACTTGCGTTTGCGCCAACC GTATCTATGTGCAGGACGGCGTCTACGATGCCTTCGCCGAGAAGCTCAAAGCCGCTGTTGCCAAACTGAAGATCGGTAAC GGCCTGGAAGACGGCACCACCACTGGCCCGCTGATCGACGGCAAGGCCGTCGCCAAGGTTCAGGAACACATCGAGGACGC CGTCTCCAAAGGTGCCAAGGTGCTGTCCGGTGGCAAGCTGATCGAAGGCAACTTCTTCGAGCCGACCATCCTGGTCGACG TGCCGAAGACGGCTGCCGTCGCCAAGGAAGAGACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAGGCTGAA GTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCCTCGTACTTCTATGCCCGCGACATGAGCCGTGTGTTCCGCGT TGCCGAGGCGCTGGAATACGGCATGGTGGGTATCAACACCGGCCTGATCTCCAACGAAGTCGCGCCGTTCGGCGGCATCA AGGCTTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAGGACTACCTCGAAATCAAGTACCTGTGCATCAGCGTC TGA Protein sequence : MQLKDAQLFRQQAFINGEWLDADSGQTINVTNPATGEVIGTVPKMGTAETRRAIEAADKALPAWRALTAKERSNKLRRWF ELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFAEEAKRVYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPYSALALVELATRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQ LMEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDGVYDAFAEKLKAAVAKLKIGN GLEDGTTTGPLIDGKAVAKVQEHIEDAVSKGAKVLSGGKLIEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDMSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCISV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-154 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-86 | 41 |
