|
Name : ssuB (PputW619_4972) Accession : YP_001751817.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : aliphatic sulfonates transport ATP-binding subunit Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 5490503 - 5491315 bp Length : 813 bp Strand : - Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease DNA sequence : ATGACCATTCTCAAGGAACAGCCGCCGCGCTTGTTGCGGGGTATCCCGCTGGCCGCCAATGGCCTGCGCAAGACCTTTGG CCAGCGTGAAGTGTTGCGTGGTATCGACCTGCACATTCCGGCCGGCCAGTTCGTTGCCATCGTCGGGCGCAGCGGCTGTG GCAAGAGCACCTTGCTGCGCCTGCTGGCCGGGCTCGACCAGCCCGGCGCCGGTGAGCTTCTGGCCGGTGCCGCACCGCTG GCCGAGGCCCGCGAAGATACCCGCCTGATGTTCCAGGACGCTCGCCTGCTGCCTTGGAAAAAGGTGATCGACAACGTCGG CCTGGGCCTGTCCGGCCACTGGCGCCCCCGTGCGCTGGAAGCACTGGAGGCGGTTGGCCTGGCTGACCGCGCCAATGAAT GGCCGGCAGCGCTCTCGGGTGGCCAGAAGCAGCGCGTGGCCCTGGCCCGGGCGCTGATTCATCAGCCACGCCTGCTGCTG CTGGACGAGCCGCTGGGTGCGCTGGATGCCCTGACCCGTATCGAGATGCAGCACCTGATCGAACGCCTGTGGCGTCAGCA CGGCTTCACCGTGCTGCTGGTCACCCATGACGTCAACGAAGCCATTGCCGTGGCCGACCGGGTGATCCTTATCGAGGACG GCGCAGTCGGCCTGGACCTCAACGTCGATCTGGCACGGCCAAGGGTGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGC GAAGTGCTCAACCGTGTTCTGTCGGCCCCGGGCACTGCGCCCGAGCCGGACCCTGTAGCCCCTCTGCCCACGCAACTGCG TTGGGCGCACTGA Protein sequence : MTILKEQPPRLLRGIPLAANGLRKTFGQREVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPGAGELLAGAAPL AEAREDTRLMFQDARLLPWKKVIDNVGLGLSGHWRPRALEALEAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLL LDEPLGALDALTRIEMQHLIERLWRQHGFTVLLVTHDVNEAIAVADRVILIEDGAVGLDLNVDLARPRVRGSHRLAALES EVLNRVLSAPGTAPEPDPVAPLPTQLRWAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 2e-32 | 46 |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-19 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-21 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 5e-21 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-21 | 42 |
