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Name : PputW619_4967 (PputW619_4967) Accession : YP_001751812.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 5485055 - 5487379 bp Length : 2325 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: pen:PSEEN0226 RNA-binding transcription accessory protein DNA sequence : ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCTCAGCAGGTCGAGGCGGCCGTGGGCCTGTTGGA CGAAGGCTCTACCGTGCCCTTCATCGCCCGTTACCGCAAGGAAGTGACCGGTAGCCTGGACGACACCCAGTTGCGCCACC TGGAAGAGCGCCTGCGCTACCTGCGCGAGCTGGACGAGCGCCGTGCGAGCATCCTGTCCAGCATCGAGGAACAGGGCAAG CTGACCCCTGAGCTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTTTACCTGCCGTACAAGCA AAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTGGGCGAGCTGGCCGACGGCCTGTTCAACGACCCGCAAC TGGCGCCGGAAAGCGAAGCCGCGCGCTTCGTCGATGCCGACAAGGGTGTCGCCGACGTCAAGGCCGCCCTCGAAGGCGCC AAGTACATCCTCATGGAGCGCTTCGCCGAAGACGCTGCCCTGCTCGACAAGCTGCGCAACTTCCTCAAGCAGGAAGCGGT GCTCAGCGCCCGTGTGGTGGCGGGCAAAGAAGAGGAAGGCGCCAAGTTCCGCGATTATTTCGCCCATGACGAACTATTGC GCACTTGCCCGTCGCACCGTGCACTGGCCATTTTCCGCGGCCGTAACGAAGGCGTGCTGAGCGCATCGCTGAAGGTTGGC GAAGAGCTGCCGGGCACCCTGCACCCGTGCGAAATGATGATTGGCAGCCACTTCGGCGTGGAAAACCGCAACCGGCCGGC TGACAAGTGGCTGGGCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAAACCGACCTGTTCGGTG AGTTGCGCGACAATGCCGAAAGCGAGGCGATCAACGTCTTCGCCCACAACCTGCACGACTTGCTGCTGGCCGCCCCGGCC GGCCCGCGTGCCACTCTGGGCTTCGACCCGGGCCTGCGTACCGGCTGCAAGGTCGCGGTGGTCGATGCCACCGGCAAGCT GCTGGACACGGCTACGGTCTATCCGCACGCACCGCGCAACGACTGGGACCGCACGATATCGGTACTGGCCGCACTTTGCG CCAAACACTCGGTGGAGCTGATTGCCATTGGCAACGGCACCGCCAGCCGCGAGAGCGACAAACTGATCGCCGAGCTGGTT AAAAAATACCCGGCGCTGAAGATCACCAAGATCATGGTCTCCGAAGCCGGTGCGTCGGTGTACTCGGCATCGGAGCTGGC TGCCCGTGAATTCCCTGACCTGGACGTGTCGATTCGTGGCGCCGTGTCGATTGCCCGCCGCCTGCAGGACCCGCTGGCAG AACTGGTGAAGATCGACCCCAAATCCATCGGTGTCGGCCAGTACCAGCACGATGTATCCCAGGTGAAGCTGGCACGCGGC CTGGACGCGGTGGTCGAGGACTGTGTGAACGCCGTGGGCGTGGACGTCAACACCGCTTCGGTCGCGCTGCTGACCCGCAT CTCCGGCCTCAACGCTACCCTGGCGCAGAACATCGTCGCGCACCGCGACGCCAATGGCCCGTTCGCCACCCGTGCCGCAC TCAAGAAGGTCAGCCGCCTGGGTGAGAAAACCTTCGAACAGGCCGCGGGCTTCCTGCGCGTAATGAACGGCGACAACCCG CTGGATGCCTCCGCCGTGCACCCCGAGGCCTACCCGCTGGTGAAACGCATCGCCGCCGACACCGGCCGTGACATCCGCTC GCTCATCGGCGACAGCGGCTTCCTCAAGCGCCTGGACCCAAAGCAGTTCACCGATGAAACCTTCGGCCTGCCCACCGTCA CCGACATCCTCCAGGAACTGGACAAGCCCGGCCGTGACCCCCGTCCCGAGTTCAAGACCGCCACCTTCCAGGACGGCGTC GAAGACCTCAAGGACCTGGAGCCCGGCATGATTCTCGAAGGCGTGGTCACCAACGTCACCAACTTCGGCGCGTTCGTCGA CATCGGCGTGCATCAGGACGGCCTGGTGCATATCTCGGCGCTGTCCGAGAAGTTCGTCAAGGACCCGCGCGAAGCGGTCA AGGCCGGTGACGTAGTCAAGGTCAAGGTCATGGAAGTGGACATCCCGCGCAAGCGTGTCGGCCTGTCCATGCGCATGAGC GATACCCCGGGCGAAAAAGTCGAAGGCAACCGTGGCGGCAACCGTGGCAATGGCGGCAACCGTCAGCAGCAGGCACCACG CCAGCGCGAAACCGCTAGCGCCGCCCCGGCGAACAACGCCATGGCTGCGCTCTTTGCCAACGCCAAGCAGTTGAAAAAGA AGTGA Protein sequence : MDSINSRIAEELGVRPQQVEAAVGLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILSSIEEQGK LTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPQLAPESEAARFVDADKGVADVKAALEGA KYILMERFAEDAALLDKLRNFLKQEAVLSARVVAGKEEEGAKFRDYFAHDELLRTCPSHRALAIFRGRNEGVLSASLKVG EELPGTLHPCEMMIGSHFGVENRNRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAESEAINVFAHNLHDLLLAAPA GPRATLGFDPGLRTGCKVAVVDATGKLLDTATVYPHAPRNDWDRTISVLAALCAKHSVELIAIGNGTASRESDKLIAELV KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQVKLARG LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVKRIAADTGRDIRSLIGDSGFLKRLDPKQFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGV EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKVEGNRGGNRGNGGNRQQQAPRQRETASAAPANNAMAALFANAKQLKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
