|
Name : PputW619_4714 (PputW619_4714) Accession : YP_001751560.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 5204683 - 5206569 bp Length : 1887 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGCAAACAAGAAAAAACGATCAACCTCAGCGAGTCGGCGCAAGTCGATCAGCAGTCCGTGCAACCCTTCCCGCGTTC GCGCAAGATCTATGTCGAGGGCTCGCGCCCGGACATCCGCGTGCCGATGCGCGAAATCAGCCTGCACGACACCCCCACCG ACTTCGGCGGCGAAGCCAACGCGCCGGTTCTGGTCTACGACACTTCCGGCCCCTACACCGATCCCGACGTCATCATCGAT GTGCGAAAAGGCCTGGCCGATGTGCGGTCGGCCTGGATCGACGCCCGTGGCGATACCGAGCGCCTGGGTGGGCTGAGCTC GAACTTCGGCCAGCAGCGCCTGAACGACGCCGAACTGGCCAAGCTGCGCTTCAACCATGTGCGCAACCCGCGCCGCGCCA AGGCTGGCGCCAACGTCTCGCAGATGCACTACGCCCGCCAAGGCATCATTACCGCCGAGATGGAATACGTCGCCATCCGC GAGAACATGAAGCTGCAGGAGGCCCGCGCTGCTGGCTTGCTCAAGCAGCAGCACGCCGGCCACAGCTTCGGCGCCAACAT CCCCAAAGAGATCACCGCCGAATTCGTGCGCGAGGAGATCGCCCGCGGCCGCGCGATCATCCCGGCCAACATCAACCACA CGGAACTGGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGCGCCCTGGGCTCC TCGATCGAGGAGGAAGTGGCCAAGCTGACCTGGGGTATTCGCTGGGGCTCAGACACGGTCATGGACCTTTCGACCGGCAA GCACATCCACGAAACTCGTGAGTGGATCATCCGCAACTCGCCGGTACCTATCGGTACCGTGCCGATCTACCAGGCCCTGG AAAAGGTCGGAGGGGTTGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACGCTGATCGAGCAGGCTGAGCAGGGCGTG GACTACTTCACCATCCATGCTGGCGTGCTGCTGCGCTACGTGCCGCTGACCGCCAAGCGGGTCACCGGTATCGTCAGCCG CGGGGGGTCGATCATGGCCAAGTGGTGCCTGGCGCATCACCAGGAGAACTTCCTGTACACGCATTTCGATGAGATCTGCG AAATCATGAAGGCCTACGACGTGAGCTTCTCTCTCGGTGACGGCCTGCGCCCAGGCTCGATTGCAGATGCCAACGACGCG GCGCAGTTCGGTGAGCTGGAAACACTTGGCGAACTGACCAAGATCGCCTGGAAGCACGACGTGCAGTGCATGATCGAAGG CCCTGGCCATGTGCCGATGCAACTGATCAAGGAGAACATGGACAAGCAGCTGGAATGCTGCGACGAAGCGCCGTTCTACA CCCTCGGCCCTCTGACCACCGACATTGCGCCTGGTTACGACCACATCACCTCGGGCATCGGCGCGGCCATGATCGGCTGG TTCGGCTGCGCCATGCTGTGCTACGTCACCCCCAAGGAGCACCTGGGCCTGCCGAACAAGGATGACGTCAAGACCGGCAT CATCACTTACAAGATCGCCGCGCATGCTGCCGACCTTGCCAAAGGCCACCCGGGCGCGCAGATCCGTGACAATGCCCTGT CCAAGGCGCGTTTCGAGTTCCGCTGGGAGGACCAGTTCAACCTGGGCCTGGACCCTGACACCGCGCGTGCCTTCCACGAC GAAACCCTGCCGAAGGAATCGGCCAAGGTCGCGCACTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCGATGAAAATCAC CCAGGAAGTACGGGAATACGCCGCCAACCTGCGCATCGATGCGGTGGATGTATCGGTTGAGGAGGGGATGCGCGAGCAGG CCGAACGGTTCCGCCAGGAAGGCAGCCAGCTGTACCACAAGGTGTAA Protein sequence : MSKQEKTINLSESAQVDQQSVQPFPRSRKIYVEGSRPDIRVPMREISLHDTPTDFGGEANAPVLVYDTSGPYTDPDVIID VRKGLADVRSAWIDARGDTERLGGLSSNFGQQRLNDAELAKLRFNHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIR ENMKLQEARAAGLLKQQHAGHSFGANIPKEITAEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGS SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGVAEDLTWELFRDTLIEQAEQGV DYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDA AQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHD ETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAANLRIDAVDVSVEEGMREQAERFRQEGSQLYHKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 77 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 77 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
