Gene Information

Name : lspA (PputW619_4558)
Accession : YP_001751407.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 5026294 - 5026809 bp
Length : 516 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGCCTAACCCTGCAGCGGGGCGCTTCGGGCGCCTTGCATGGCTCTGGCTCAGCCTGCTGGTCCTGGTCGTTGACCAGGC
CACCAAGCTGTATTTCAACAACGCCCTGAGCATGTATCAGCAGATCGTGGTCATCCCTGACTACTTCAGCTGGACCCTGG
CCTACAACACCGGCGCGGCTTTCAGCTTCCTTGCCGACAGCTCCGGCTGGCAGCGCTGGTTGTTCGCCCTGATCGCCGTG
GTGGTCAGCGCCGTGCTGGTGGTCTGGCTCAAGCGCCTGGGGCGCAACGAGACCTGGCTGGCCGTGGCGCTGGCGCTGGT
GCTCGGTGGAGCGCTGGGCAACCTGTACGATCGAATCGTGCTGGGCCATGTGGTGGATTTCATCCTGGTGCACTGGAAGA
ACGTTCATCACTTCCCGGCCTTCAATGTGGCCGACAGCGCCATCACCGTTGGTGCGGTGATGCTGGCGCTGGATATGTTC
AAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGA

Protein sequence :
MPNPAAGRFGRLAWLWLSLLVLVVDQATKLYFNNALSMYQQIVVIPDYFSWTLAYNTGAAFSFLADSSGWQRWLFALIAV
VVSAVLVVWLKRLGRNETWLAVALALVLGGALGNLYDRIVLGHVVDFILVHWKNVHHFPAFNVADSAITVGAVMLALDMF
KSKKSEDPVHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 9e-04 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 9e-04 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 9e-04 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 0.001 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 0.001 42