Gene Information

Name : PputW619_4391 (PputW619_4391)
Accession : YP_001751240.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4847774 - 4848448 bp
Length : 675 bp
Strand : +
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN0943 DNA-binding heavy metal response regulator

DNA sequence :

ATGCGTGTGCTGATCATCGAAGACGAAGAGAAAACCGCTGACTACCTGCATCGCGGCCTGAGCGAGCAAGGCTTCACTGT
CGACCTGGCACGGGACGGCATCGACGGCCTGCACCTGGCGCTTGAAGGTGACTATGCGGTGATCGTGCTCGATGTGATGC
TGCCGGGTCTGGATGGCTATGGCGTGCTGCGTGCCTTGCGTGCCCGTAAGCAGACACCGGTGATCATGCTCACCGCCCGC
GAGCGCGTCGAGGACCGCATCCACGGGCTGCGCGAAGGTGCCGACGATTACCTTGGCAAGCCGTTCTCCTTCCTTGAACT
GGTCGCCCGCCTGCAGGCCCTGACTCGCCGCAGCGGCAGCCACGAGCCACTGCAGGTGCAGGTCGGCGACCTGTGGATCG
ACCTGATGGCGCGCAAGGCCAGCCGCGGCGGCCAACGCCTGGACCTGACTGCAAAGGAGTTCTCGCTGCTCAGCGTGCTG
GCCAGGCGCCAAGGCGAAATACTCTCCAAGACAGCCATCGCCGAGCTGGTCTGGGACATCAACTTCGACAGCGATGCCAA
TGTCGTCGAAGTGGCCATAAAGCGCCTGCGCGCCAAGCTCGACGGGCCATTTGACAACAAGCTGCTGCATACCATCCGAG
GCATGGGCTATGTCCTGGAAAACCGTGCCGGTTAA

Protein sequence :

MRVLIIEDEEKTADYLHRGLSEQGFTVDLARDGIDGLHLALEGDYAVIVLDVMLPGLDGYGVLRALRARKQTPVIMLTAR
ERVEDRIHGLREGADDYLGKPFSFLELVARLQALTRRSGSHEPLQVQVGDLWIDLMARKASRGGQRLDLTAKEFSLLSVL
ARRQGEILSKTAIAELVWDINFDSDANVVEVAIKRLRAKLDGPFDNKLLHTIRGMGYVLENRAG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	5e-55	55
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	5e-54	54

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0125	Protein	1e-62	57
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0083	Protein	6e-58	57
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0197	Protein	2e-58	55
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0638	Protein	5e-50	54
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0111	Protein	4e-58	53
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0308	Protein	4e-54	50
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	BAC0347	Protein	2e-51	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	VFG0596	Protein	2e-55	55
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	VFG1389	Protein	3e-38	48
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	VFG1386	Protein	2e-35	43
PputW619_4391	YP_001751240.1	two component heavy metal response transcriptional regulator	VFG1390	Protein	1e-39	41