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Name : PputW619_4179 (PputW619_4179) Accession : YP_001751028.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4604734 - 4606182 bp Length : 1449 bp Strand : - Note : PFAM: type II secretion system protein E; KEGG: pen:PSEEN4280 type II secretion system protein E DNA sequence : ATGCTGCCCTATCGCCTTGCGCGTCAGGCCGGGCTGGCCATGGCCCCGGCGGATACCGGCTGGCAGTTGTGGCTGCGCCG CGATGCCGACAGTAACCAACTGCAGGAACTGCTGCGTGTGCATGGCCAGCCCGTGGCACTGCACTACCTGGAAGCTGCGG CGTTCGACGAACGCCTCGGCCAGTTGTATCAGGCCGGGGATGCTGCCACCGAAGCACTGATCGAAGGCATTGGCGAACAG GTTGATCTGGACAGCCTGATGAGCGAAATGCCGCGCATCGAGGACCTGCTCGAAAGCGATGATGAAGCCCCGGTGATCCG CCTGATCAACGGCCTGTTCGGCCAGGCCCTGCGCCTGCGCGCTTCGGACATTCATATCGAGACCTTTGAGCAGAGCCTGG TGGTGCGCCTGCGTGTCGACGGCCACCTGCGTGAGGTGTTGCGCCCGCCGCGCGCGTTGTCGGCCATGCTGGTGTCGCGG ATCAAGGTCATGGCGCGCCTGGACATCGCCGAGAAGCGCCAGCCCCAGGACGGTCGCATCACCTTGCGCGCCGCCGGGCG TGAGGTGGACGTGCGCGTCTCGACCTTGCCCGGTATCCATGGCGAGCGCGTGGTGATGCGCGTGCTCGACAAGCAGGCCA GCTTGCTGGCACTGGGCAACCTGGGCATGCCCCCGGCAGTGCTGCACGGCCTGCGCAGCTGCCTGACAAGGCCCAACGGC ATCGTGCTGTCCACCGGGCCGACCGGCTCGGGCAAGACCACCACCCTGTACGCCAGCCTCAACAGCCTCAATGATGGCAG CCGCAACATTCTCACCGTGGAGGACCCGGTGGAATACGCCATCGCCGGCATTGGCCAGACGGCCATCAATCCGCGCGCCG GGCTGACCTTTGCCACTGGCTTGCGCGCCATCCTGCGCCAGGACCCGGACGTGATCATGCTCGGCGAAATCCGCGACCAG GAAACTGCGCAGATCGCCGTGCAGGCCAGCCTCACCGGCCACTTGGTACTGTCGACGTTGCACACCAACAGCGCAGTGGG CGCGGTCACCCGCTTGCGCGACATGGGCATCGAGCCGTTCCTGATCGCCTCATGCCTGCGTGGCGTGCTGGCCCAGCGCC TGGTGCGACGGCTGTGCCATTGCGCGGTGGCGCAGCCACTGCAGCCGGCCGAACGGGCGCTGTGGCCTGAGCTGGCGGCG CTGGGCAGCAGCTACCACGCGGTGGGCTGCGAGCAGTGCCAGGGCACTGGCTATATCGGTCGTTTGGGCCTGTACGAATT CGTCGAACTCGACGCCGGCCTGATCGGCCTGCTGTATGACGGCGCCAGTGAACTGGCCATGCAGGAGTACCTGGCCGAGC GCCGCCAGAGCCTGGTGGCGATGGCCAGTGATTGCCTGGCCCGCGGCGAGACCAGCCTGGCTGAAGTATTGCGTGTGGTG CAGGGCTGA Protein sequence : MLPYRLARQAGLAMAPADTGWQLWLRRDADSNQLQELLRVHGQPVALHYLEAAAFDERLGQLYQAGDAATEALIEGIGEQ VDLDSLMSEMPRIEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLRPPRALSAMLVSR IKVMARLDIAEKRQPQDGRITLRAAGREVDVRVSTLPGIHGERVVMRVLDKQASLLALGNLGMPPAVLHGLRSCLTRPNG IVLSTGPTGSGKTTTLYASLNSLNDGSRNILTVEDPVEYAIAGIGQTAINPRAGLTFATGLRAILRQDPDVIMLGEIRDQ ETAQIAVQASLTGHLVLSTLHTNSAVGAVTRLRDMGIEPFLIASCLRGVLAQRLVRRLCHCAVAQPLQPAERALWPELAA LGSSYHAVGCEQCQGTGYIGRLGLYEFVELDAGLIGLLYDGASELAMQEYLAERRQSLVAMASDCLARGETSLAEVLRVV QG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-107 | 56 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-107 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputW619_4179 | YP_001751028.1 | type II secretion system protein E | VFG0182 | Protein | 1e-104 | 56 |
| PputW619_4179 | YP_001751028.1 | type II secretion system protein E | VFG2048 | Protein | 1e-106 | 56 |
| PputW619_4179 | YP_001751028.1 | type II secretion system protein E | VFG1876 | Protein | 1e-109 | 50 |
| PputW619_4179 | YP_001751028.1 | type II secretion system protein E | VFG2426 | Protein | 1e-65 | 47 |
| PputW619_4179 | YP_001751028.1 | type II secretion system protein E | VFG1880 | Protein | 1e-68 | 42 |
| PputW619_4179 | YP_001751028.1 | type II secretion system protein E | VFG0112 | Protein | 1e-70 | 41 |
