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Name : PputW619_4178 (PputW619_4178) Accession : YP_001751027.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4603528 - 4604730 bp Length : 1203 bp Strand : - Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: pen:PSEEN4279 type II secretion system protein F DNA sequence : ATGCCGACCTTTCGCTACCAGGCCGTTGATCTGGCCGGCAAGACCCACAAAGCCAGCCTGCAAGCCGATACCGAACGCCA CGCACGTCAGTTGCTGCGCGAGCAGGGGCTGTTCCCTCGCCAGTTGCAGCGCTTCGAAAGCGGTGCCCGGCAGCCTCGCC GACAACGCTTGAGCCGTGCCCAGCTGTGTGAGCTGACACGCCAGCTGGCGACTTTGACCGGCGCGGGCATCCCGCTGGTC GATGCCTTGGCGACGCTTGAGCGCCAGTTGCGCCAGCCAGCCCTGCACGGGGTGCTGGTGGCTCTGCGTGGCTCGCTCGC CGAGGGCCTGGGCCTGGCCCGCAGCCTGGCCCGCCAGGGCGCGCCTTTCACCGGCCTGTACTGCGCGCTGGTCGAAGCCG GTGAGCGCTCCGGGCGGTTGGCCCAGGTGCTTACCCGGCTGGCAGACCACCTGGAACAGGTGCAGCGCCAGCAGCACAAG GCGCGCACGGCACTGATCTACCCCTGCGTGCTGATGGGCGTGTCACTGGCGGTGGTGATCGGCCTGATGACCTTCGTCGT ACCCAAGCTCACCGAACAGTTTGCCCATGCCGGGCAGAGCCTGCCGCTGATCACCTCATTACTTATCGGCCTGAGCCAAG GCTTGGTGCACGCCGGTCCCTGGTTGCTGGGGCTGGCGATCCTGACGTCGCTGCTGGCCAGCTGGTTGCTGCGCAAGCCG CACTGGTGCCTGCGCCGCGACGACCTGCTGTTGCGCCTGCCGCGCGTGGGGGGCCTGTTGCAGGTGCTGGAGAGTGCCCG CCTGGCGCGCAGCCTGGCGATCCTCACCAGCAGCGGTGTTGCCTTGCTCGAAGCCTTGCAGGTGGCCACTGAAACCGTCG GCAACCGGCGCATTCGCCTGGCCATGGAGCAGGTGCGCCAGCAGGTGCAGGGCGGCACCAGCCTGCACAGGGCGCTGGAT GGTTGCCAGCAGTTCCCGCCGTTGCTGGTGAACATGGTCGGCAGTGGCGAGGCCAGCGGCACCCTGGCCGACATGCTCGA GCGCGTGGCCGACGACCAGGAGCGTGGCTTTGCGCGCCAGGTGGATACGGCCATGGCGCTTTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTAGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAACTG TAG Protein sequence : MPTFRYQAVDLAGKTHKASLQADTERHARQLLREQGLFPRQLQRFESGARQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHGVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGRLAQVLTRLADHLEQVQRQQHK ARTALIYPCVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGLAILTSLLASWLLRKP HWCLRRDDLLLRLPRVGGLLQVLESARLARSLAILTSSGVALLEALQVATETVGNRRIRLAMEQVRQQVQGGTSLHRALD GCQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-49 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputW619_4178 | YP_001751027.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-53 | 43 |
