|
Name : PputW619_3903 (PputW619_3903) Accession : YP_001750752.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Resistance Product : cystathionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 4.4.1.1 Position : 4335230 - 4336402 bp Length : 1173 bp Strand : - Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN4039 cystathionine gamma-synthase DNA sequence : ATGTCCGACAAGCCGCGCAATTTCGCCACCCGTACCATCCACGCCGGTGAGCAGTTCAGTGTCGCCGACAACGCGATCTT CCCGCCTATCTACACCGCCAGTTCGTATATCAAGCGCAGCCTCGATGACAACCCCGAGTACGCCTACAGCCGCGTGGGCA ACCCGACCCGGCATGCCTATGAAAGCTGTGTCGCGGCGCTTGAAGAGGGTGTTGGCGCGGTGGCCTGTGCCTCCGGTGTA AACGCCACCGCCACGGTGCTGGAGCTGCTCCCCAAGGACGCTCATGTGGTGGTGATGAACGGTGTCTACGGCGGCACCTT CCGCATTCTTGAAGACTACCGCGCACGCACCTCGGGCCTTACCACCACCTATGTCGACCTCAACGATATCGCGGCCGTAG CGGCGGCGATCAAACCCGAAACCCAGCTGATCTGGATCGAGTCGCCGACCAACCCGTTGCTGCACCTGGTCGACATCAAG GCGGTCTGCGACCTGGCACGGGCGCGTGGCATTCTCACCTGCATCGACAACACCTTCTGCTCGCCGTGGAACCAGCGGCC GATCACCCTCGGTGTGGACCTGGTGATGCATTCGGCCAGCAAATACATTGGCGGCCACTCCGACCTGACCGGCGGCGTGG TGGTGGCTGCCAATGACGCCTTGCTGGGGCGCCTGCGCAAGATCAGCATGGCCGTCGGGGCAATCCAGGGTCCGTTCGAC TGTTACCTGGCTTTGCGTGGCCTGAAGACCCTCGACGTGCGCATGGAGCGTCAGTGTGCCAATGCCCTGCAGGTGGCACG CTTTCTGGAAAGCCATCCGCAGATCGAGCAGGTGTATTACCCGGGCCTGGAGAGCCACCCGCAGCACGCGCTGTGCAAAC GCCAGATGCGCGCTGGCGGGGCGGTGGTGGCAATGAAGGTCAAGAACGGTGACCGGGCGGCGCTCAATCGCCTGGTGGAG GCATTGCAGATCTTTGTTCTGGCCGACTCGCTGGGCGGCGTGGAGAGCATGATCAACCACTCCTGGAGCATGTCGCACAA CTCACTGAGCCCCGAGCAGAAGGGGGTGATGGGGATCAGTGAGAGCCTGTTGCGGCTGTCGATCGGGATCGAGGATTACC GGGATCTGATCGAAGACCTGGACGGGGCTTTGAACGCATCAGCTGCTGTGTAA Protein sequence : MSDKPRNFATRTIHAGEQFSVADNAIFPPIYTASSYIKRSLDDNPEYAYSRVGNPTRHAYESCVAALEEGVGAVACASGV NATATVLELLPKDAHVVVMNGVYGGTFRILEDYRARTSGLTTTYVDLNDIAAVAAAIKPETQLIWIESPTNPLLHLVDIK AVCDLARARGILTCIDNTFCSPWNQRPITLGVDLVMHSASKYIGGHSDLTGGVVVAANDALLGRLRKISMAVGAIQGPFD CYLALRGLKTLDVRMERQCANALQVARFLESHPQIEQVYYPGLESHPQHALCKRQMRAGGAVVAMKVKNGDRAALNRLVE ALQIFVLADSLGGVESMINHSWSMSHNSLSPEQKGVMGISESLLRLSIGIEDYRDLIEDLDGALNASAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-68 | 41 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 4e-54 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputW619_3903 | YP_001750752.1 | cystathionine gamma-lyase | BAC0207 | Protein | 3e-62 | 42 |
