Gene Information

Name : PputW619_3550 (PputW619_3550)
Accession : YP_001750402.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3941530 - 3942213 bp
Length : 684 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3671 DNA-binding response regulator

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCAGCGGCATCTGCGCCGGCCTCACCGCCCAAGGCCTGACCGT
CGACCGCGTAGCCAACGCCGGTGCCGCCCGGGCCATGCTCCAGGCGGCGCAGTTCGATGTGATGATCCTCGACCTTGGCC
TGCCCGATGAAGACGGCCTCAAGCTGTTGCGCCGCTTGCGTCAGCAGGGTATCGATCTGCCGGTGCTGGTGCTCACCGCG
CGCGATGCGGTCACCGACCGGGTCGACGGCCTGCAGGCCGGTGCCGACGACTACCTGCTCAAGCCCTTCGACCTGCGCGA
GCTGGCCGCGCGTCTGCACACCTTGCTGCGCCGGGTTGCCGGGCGGGCGGTGAACGTGATCGAGCATGGCCCGCTGCGCT
ACGACCCCAGTAGCTGCGAAGCGACCCTGGCCGGTCAGCCGGTCGACCTGTCGCGGCGTGAGCAGGCCTTGCTCCAGGCG
CTGCTGCAGAACCCGGGCCGGGTGCTGTCCAGTGAACAGCTCAAGGACTGCGTGTACGGCTTCAGCGACGAAGTCGAAAG
CAACGCCCTCAACGTGCATATCCATCACTTGCGCCGCAAGCTTGGCAACAGCATCGTCGAGACCGTGCGCGGCCTGGGCT
ACCGCCTTGGCCCGGCGCAGGCGCCAGAGGAAGCCGCATCATGA

Protein sequence : 
MHVLLCEDDDLIASGICAGLTAQGLTVDRVANAGAARAMLQAAQFDVMILDLGLPDEDGLKLLRRLRQQGIDLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGQPVDLSRREQALLQA
LLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNSIVETVRGLGYRLGPAQAPEEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-50 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3550 YP_001750402.1 two component transcriptional regulator BAC0487 Protein 6e-30 45
PputW619_3550 YP_001750402.1 two component transcriptional regulator CP000647.1.gene1136. Protein 6e-24 41
PputW619_3550 YP_001750402.1 two component transcriptional regulator NC_002516.2.879194.p Protein 3e-26 41
PputW619_3550 YP_001750402.1 two component transcriptional regulator BAC0530 Protein 7e-24 41
PputW619_3550 YP_001750402.1 two component transcriptional regulator NC_002695.1.913289.p Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3550 YP_001750402.1 two component transcriptional regulator VFG1389 Protein 2e-22 44
PputW619_3550 YP_001750402.1 two component transcriptional regulator VFG0473 Protein 1e-33 43